RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LINC01465Q8N7H1 131 aa14.33□□□□□ -0.12
COPS7A-221ENST00000546229 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
COPS7A-221ENST00000546229 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.12
COPS7A-221ENST00000546229 LENG9Q96B70 501 aa14.33□□□□□ -0.12
COPS7A-221ENST00000546229 NOC2LQ9Y3T9 749 aaKnown RBP14.33□□□□□ -0.12
COPS7A-221ENST00000546229 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 C9IYK1 514 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 C22orf31O95567 290 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 CYP3A4P08684 503 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 SARSP49591 514 aaKnown RBP14.32□□□□□ -0.12
COPS7A-221ENST00000546229 PAK2Q13177 524 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 DSC3Q14574 896 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 PAN2Q504Q3 1202 aaKnown RBP14.32□□□□□ -0.12
COPS7A-221ENST00000546229 EFHBQ8N7U6 833 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 KCNB2Q92953 911 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 AZI2Q9H6S1 392 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 RNF19AQ9NV58 838 aa14.32□□□□□ -0.12
COPS7A-221ENST00000546229 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-221ENST00000546229 MYH9P35579 1960 aaKnown RBP14.31□□□□□ -0.12
COPS7A-221ENST00000546229 SMCO2A6NFE2 343 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 ZBTB43O43298 467 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 CSPG5O95196 566 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 KLRC1P26715 233 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 KRT76Q01546 638 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 COASYQ13057 564 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 KCNC3Q14003 757 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 PKN1Q16512 942 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 PFKFB3Q16875 520 aaPredicted RBP14.31□□□□□ -0.12
COPS7A-221ENST00000546229 HFE2Q6ZVN8 426 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
COPS7A-221ENST00000546229 FAM228AQ86W67 206 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 NME8Q8N427 588 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 POF1BQ8WVV4 589 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 MUTYHQ9UIF7 546 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 CD207Q9UJ71 328 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 FAM50BQ9Y247 325 aa14.31□□□□□ -0.12
COPS7A-221ENST00000546229 KLF18A0A0U1RQI7 1052 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 GOLGA8AA7E2F4 631 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 GOLGA8BA8MQT2 603 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 LOC730098B7Z3J9 87 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 FSCN2O14926 492 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 HBP1O60381 514 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 GPR32O75388 356 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 FAM189BP81408 668 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 RBM10P98175 930 aaKnown RBP14.3□□□□□ -0.12
COPS7A-221ENST00000546229 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
COPS7A-221ENST00000546229 ZMYND12Q9H0C1 365 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 CWH43Q9H720 699 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
COPS7A-221ENST00000546229 MAFBQ9Y5Q3 323 aaPredicted RBP14.3□□□□□ -0.12
COPS7A-221ENST00000546229 DDX39AO00148 427 aaKnown RBP14.29□□□□□ -0.12
COPS7A-221ENST00000546229 IPO5O00410 1097 aaKnown RBP14.29□□□□□ -0.12
COPS7A-221ENST00000546229 STAG3L1P0CL83 205 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 CPA1P15085 419 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
COPS7A-221ENST00000546229 FAM102BQ5T8I3 360 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
COPS7A-221ENST00000546229 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 PLA2G4DQ86XP0 818 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 RNF135Q8IUD6 432 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 SUSD6Q92537 303 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 AGXT2Q9BYV1 514 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 BARX2Q9UMQ3 279 aaPredicted RBP14.29□□□□□ -0.12
COPS7A-221ENST00000546229 ST3GAL5Q9UNP4 418 aa14.29□□□□□ -0.12
COPS7A-221ENST00000546229 M0QZ92 97 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 ZNF862O60290 1169 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 CIITAP33076 1130 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 NRIP1P48552 1158 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 NHLH1Q02575 133 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 NTRK3Q16288 839 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 ZNF484Q5JVG2 852 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 RNF20Q5VTR2 975 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 JAKMIP3Q5VZ66 844 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 ZNF746Q6NUN9 644 aaPredicted RBP14.28□□□□□ -0.12
COPS7A-221ENST00000546229 PDXDC2PQ6P474 469 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 FBXL16Q8N461 479 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 POP1Q99575 1024 aaKnown RBP14.28□□□□□ -0.12
COPS7A-221ENST00000546229 OSMRQ99650 979 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 ADAM2Q99965 735 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 IGFLR1Q9H665 355 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 ZNF302Q9NR11 478 aa14.28□□□□□ -0.12
COPS7A-221ENST00000546229 ZDBF2Q9HCK1 2354 aa14.27□□□□□ -0.12
COPS7A-221ENST00000546229 FGFR1P11362 822 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 NDUFV1P49821 464 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 CRYBB1P53674 252 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-221ENST00000546229 ERVFC1P60507 584 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 UBE3AQ05086 875 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 DUSP6Q16828 381 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 SWSAP1Q6NVH7 229 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 LRRC55Q6ZSA7 311 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 SLC24A5Q71RS6 500 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 COLGALT1Q8NBJ5 622 aa14.27□□□□□ -0.13
COPS7A-221ENST00000546229 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-221ENST00000546229 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms