RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CREB1P16220 341 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 GBP1P32455 592 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 PPP1R2P41236 205 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 ZNF131P52739 623 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 BNIP1Q12981 228 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 SEPT2Q15019 361 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 PABPC3Q9H361 631 aaKnown RBP13.74□□□□□ -0.21
SMG8-202ENST00000543872 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
SMG8-202ENST00000543872 CTSWP56202 376 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 DR1Q01658 176 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
SMG8-202ENST00000543872 RNF220Q5VTB9 566 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 MFN1Q8IWA4 741 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 SUDS3Q9H7L9 328 aaPredicted RBP13.73□□□□□ -0.21
SMG8-202ENST00000543872 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 AKAP11Q9UKA4 1901 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 OR52Z1P0C646 297 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 RFC5P40937 340 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 ROR2Q01974 943 aaKnown RBP13.73□□□□□ -0.21
SMG8-202ENST00000543872 CNGA2Q16280 664 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
SMG8-202ENST00000543872 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 RASGRF2O14827 1237 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
SMG8-202ENST00000543872 DDAH1O94760 285 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 LRRC55Q6ZSA7 311 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 RMDN2Q96LZ7 410 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 EDEM3Q9BZQ6 932 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 CPVLQ9H3G5 476 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 RGL1Q9NZL6 768 aa13.73□□□□□ -0.21
SMG8-202ENST00000543872 ABCD1P33897 745 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 C6orf118Q5T5N4 469 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 VSIG1Q86XK7 387 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 ATP8B4Q8TF62 1192 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 TRIM7Q9C029 511 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 EPB41L4BQ9H329 900 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
SMG8-202ENST00000543872 MYH2Q9UKX2 1941 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 FLT1P17948 1338 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 TSPY2A6NKD2 308 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
SMG8-202ENST00000543872 MYLK4Q86YV6 388 aaPredicted RBP13.72□□□□□ -0.21
SMG8-202ENST00000543872 PGM2Q96G03 612 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 SCNN1BP51168 640 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 GUF1Q8N442 669 aaKnown RBP13.72□□□□□ -0.21
SMG8-202ENST00000543872 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
SMG8-202ENST00000543872 TMEM237Q96Q45 408 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 NUDCD1Q96RS6 583 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 ERP44Q9BS26 406 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 ARL2BPQ9Y2Y0 163 aa13.72□□□□□ -0.21
SMG8-202ENST00000543872 LRP6O75581 1613 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 ADAM9Q13443 819 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 LONRF1Q17RB8 773 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 GALNTL6Q49A17 601 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 TEX9Q8N6V9 391 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 LRRC57Q8N9N7 239 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 MARCH10Q8NA82 808 aaPredicted RBP13.71□□□□□ -0.21
SMG8-202ENST00000543872 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.21
SMG8-202ENST00000543872 AGTP01019 485 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 ABCB4P21439 1286 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 BARGINQ6ZT62 677 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 ARHGAP22Q7Z5H3 698 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 GBP7Q8N8V2 638 aaPredicted RBP13.71□□□□□ -0.22
SMG8-202ENST00000543872 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 NAGPAQ9UK23 515 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 AMFRQ9UKV5 643 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.22
SMG8-202ENST00000543872 TMEM120BA0PK00 339 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 SLC9A1P19634 815 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
SMG8-202ENST00000543872 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
SMG8-202ENST00000543872 LRRC63Q05C16 580 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 LLGL1Q15334 1064 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 MYOCDQ8IZQ8 938 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 RNF8O76064 485 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 KLC1Q07866 573 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 MUM1Q2TAK8 710 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 TAOK1Q7L7X3 1001 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
SMG8-202ENST00000543872 PRDM16Q9HAZ2 1276 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 ERVK-5Q9HDB9 667 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 ARPP21Q9UBL0 812 aaPredicted RBP13.7□□□□□ -0.22
SMG8-202ENST00000543872 SLIT3O75094 1523 aa13.7□□□□□ -0.22
SMG8-202ENST00000543872 FLOT1O75955 427 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms