RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 PRRX2Q99811 253 aa22.77■■□□□ 1.24
LPCAT3-211ENST00000543794 ADAM2Q99965 735 aa22.77■■□□□ 1.24
LPCAT3-211ENST00000543794 CDHR5Q9HBB8 845 aa22.77■■□□□ 1.24
LPCAT3-211ENST00000543794 RIC8AQ9NPQ8 531 aa22.77■■□□□ 1.24
LPCAT3-211ENST00000543794 C1orf112Q9NSG2 853 aa22.77■■□□□ 1.24
LPCAT3-211ENST00000543794 FOSP01100 380 aaPredicted RBP22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 PTPN5P54829 565 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 SPOUT1Q5T280 376 aaKnown RBP22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 FAM102BQ5T8I3 360 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 WWC2Q6AWC2 1192 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 PDE12Q6L8Q7 609 aaKnown RBP22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 TYW1BQ6NUM6 668 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 ABHD15Q6UXT9 468 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 SGMS1Q86VZ5 419 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 VN1R2Q8NFZ6 395 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 PHOX2BQ99453 314 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 CDCA3Q99618 268 aaPredicted RBP22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 LSG1Q9H089 658 aaKnown RBP22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 TLR9Q9NR96 1032 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 ST3GAL5Q9UNP4 418 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 GINS2Q9Y248 185 aa22.76■■□□□ 1.23
LPCAT3-211ENST00000543794 FSD2A1L4K1 749 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 TBKBP1A7MCY6 615 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 C9IYK1 514 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 SLC27A2O14975 620 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 FGF18O76093 207 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 CCNE2O96020 404 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 IBSPP21815 317 aaPredicted RBP22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 ERVFC1P60507 584 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 FAM189BP81408 668 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 DUSP6Q16828 381 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 ODR4Q5SWX8 454 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 SUGP1Q8IWZ8 645 aaKnown RBP22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 TMEM40Q8WWA1 233 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 PGBD1Q96JS3 809 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 RPGRIP1Q96KN7 1286 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 LRRC2Q9BYS8 371 aa22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 TYW1Q9NV66 732 aaKnown RBP22.75■■□□□ 1.23
LPCAT3-211ENST00000543794 DENND3A2RUS2 1198 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 GPR182O15218 404 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 RBM10P98175 930 aaKnown RBP22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 SIGLEC14Q08ET2 396 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 TMEM184AQ6ZMB5 413 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 MICU3Q86XE3 530 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 FBXL6Q8N531 539 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 ANO3Q9BYT9 981 aa22.74■■□□□ 1.23
LPCAT3-211ENST00000543794 FSCN2O14926 492 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 SREBF1P36956 1147 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 NAPAP54920 295 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 TCF15Q12870 199 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 KCNC3Q14003 757 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 NECTIN1Q15223 517 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 ZNF484Q5JVG2 852 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 FAM160B1Q5W0V3 765 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 PPP1R18Q6NYC8 613 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 NIPA1Q7RTP0 329 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 NEK1Q96PY6 1258 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 S1PR5Q9H228 398 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 TMEM260Q9NX78 707 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 COL1A2P08123 1366 aa22.73■■□□□ 1.23
LPCAT3-211ENST00000543794 ZBTB42B2RXF5 422 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 BACH1O14867 736 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 CRYBB1P53674 252 aaPredicted RBP22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 FUT2Q10981 343 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 CREB3L3Q68CJ9 461 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 SYNE3Q6ZMZ3 975 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 CCDC60Q8IWA6 550 aaPredicted RBP22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 THNSL1Q8IYQ7 743 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 COLGALT1Q8NBJ5 622 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 CWH43Q9H720 699 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 ELAC1Q9H777 363 aaKnown RBP22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 ATP6V0A4Q9HBG4 840 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 TMEM161AQ9NX61 479 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 HCSTQ9UBK5 93 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 LZTS1Q9Y250 596 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 KIAA1671Q9BY89 1806 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 ZDBF2Q9HCK1 2354 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 CNTNAP5Q8WYK1 1306 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 USP34Q70CQ2 3546 aa22.72■■□□□ 1.23
LPCAT3-211ENST00000543794 DDX39AO00148 427 aaKnown RBP22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 DHX15O43143 795 aaKnown RBP22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 ATP4AP20648 1035 aa22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 PLCB3Q01970 1234 aa22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 PDXDC2PQ6P474 469 aa22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 RASGRP4Q8TDF6 673 aa22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 ASIC4Q96FT7 647 aa22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 ZNF302Q9NR11 478 aa22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 RBM28Q9NW13 759 aaKnown RBP22.71■■□□□ 1.23
LPCAT3-211ENST00000543794 SMCO2A6NFE2 343 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 LAG3P18627 525 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 ZNF76P36508 570 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 CLK2P49760 499 aaKnown RBP22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 ADCY7P51828 1080 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 AP3B2Q13367 1082 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 DSC3Q14574 896 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 SWSAP1Q6NVH7 229 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 MIS18BP1Q6P0N0 1132 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 FAM228AQ86W67 206 aa22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 MRPS27Q92552 414 aaKnown RBP22.7■■□□□ 1.22
LPCAT3-211ENST00000543794 GLT8D2Q9H1C3 349 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms