RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 RIPK1Q13546 671 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 NT5DC3Q86UY8 548 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 NEK9Q8TD19 979 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 ATXN2LQ8WWM7 1075 aaKnown RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 AMFRQ9UKV5 643 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 RGS16O15492 202 aaPredicted RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 ANP32DO95626 131 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 PMS2P54278 862 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 MAB21L3Q8N8X9 362 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 CCHCR1Q8TD31 782 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 ATP8B4Q8TF62 1192 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 PGM2Q96G03 612 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 PRMT1Q99873 361 aaKnown RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 TXLNGYQ9BZA5 131 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 EMILIN3Q9NT22 766 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 NUDT17P0C025 328 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 NR2F2P24468 414 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 DR1Q01658 176 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 EXOC3L4Q17RC7 722 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 ADAT2Q7Z6V5 191 aaKnown RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 SCFD1Q8WVM8 642 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 HES6Q96HZ4 224 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
SMCR5-201ENST00000543475 KCTD10Q9H3F6 313 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 ZHX3Q9H4I2 956 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 AZI2Q9H6S1 392 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 C15orf41Q9Y2V0 281 aa13.63□□□□□ -0.23
SMCR5-201ENST00000543475 LAMB2P55268 1798 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 A0A0A6YYK5 440 aaPredicted RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 POU5F1Q01860 360 aaKnown RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 BATF3Q9NR55 127 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 NR2E1Q9Y466 385 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 DAAM1Q9Y4D1 1078 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 GOLGA6L10A0A0M3HER8 536 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 RASA1P20936 1047 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 IFNAR2P48551 515 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 ADCY7P51828 1080 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 PLTPP55058 493 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 PTENP60484 403 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 SH3RF3Q8TEJ3 882 aaPredicted RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 ERP44Q9BS26 406 aa13.62□□□□□ -0.23
SMCR5-201ENST00000543475 ARMCX3Q9UH62 379 aaPredicted RBP13.62□□□□□ -0.23
SMCR5-201ENST00000543475 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 AFPP02771 609 aaKnown RBP13.61□□□□□ -0.23
SMCR5-201ENST00000543475 PON1P27169 355 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 PRKCIP41743 596 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 TNNI2P48788 182 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 IFI35P80217 286 aaPredicted RBP13.61□□□□□ -0.23
SMCR5-201ENST00000543475 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 GJA10Q969M2 543 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 COA7Q96BR5 231 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 ADAM7Q9H2U9 754 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 EPB41L4BQ9H329 900 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 ABCF3Q9NUQ8 709 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 AFF2P51816 1311 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 E9PMD0 336 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
SMCR5-201ENST00000543475 COPB2P35606 906 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 NPEPPSP55786 919 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 SLC29A2Q14542 456 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 EDRF1Q3B7T1 1238 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 DCAF17Q5H9S7 520 aaPredicted RBP13.61□□□□□ -0.23
SMCR5-201ENST00000543475 DUPD1Q68J44 220 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 GPBP1Q86WP2 473 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 TGFBRAP1Q8WUH2 860 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
SMCR5-201ENST00000543475 GLG1Q92896 1179 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 CCDC113Q9H0I3 377 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 ZDHHC18Q9NUE0 388 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 SAP30BPQ9UHR5 308 aaKnown RBP13.61□□□□□ -0.23
SMCR5-201ENST00000543475 ROBO3Q96MS0 1386 aa13.61□□□□□ -0.23
SMCR5-201ENST00000543475 ANXA13P27216 316 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
SMCR5-201ENST00000543475 PPP2R5EQ16537 467 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 TCERG1LQ5VWI1 586 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 SPTY2D1Q68D10 685 aaPredicted RBP13.6□□□□□ -0.23
SMCR5-201ENST00000543475 NAIF1Q69YI7 327 aaPredicted RBP13.6□□□□□ -0.23
SMCR5-201ENST00000543475 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 AGAP11Q8TF27 550 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
SMCR5-201ENST00000543475 NAP1L3Q99457 506 aaPredicted RBP13.6□□□□□ -0.23
SMCR5-201ENST00000543475 MTFR1LQ9H019 292 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 OSGEPQ9NPF4 335 aa13.6□□□□□ -0.23
SMCR5-201ENST00000543475 NOP53Q9NZM5 478 aaKnown RBP13.6□□□□□ -0.23
SMCR5-201ENST00000543475 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms