RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SNAP25	P60880	206 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	PURA	Q00577	322 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	CSTF1	Q05048	431 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	PTPN11	Q06124	597 aa	Predicted RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	SEC23A	Q15436	765 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	GPATCH4	Q5T3I0	446 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	CWC27	Q6UX04	472 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	SLC30A10	Q6XR72	485 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	MFSD6	Q6ZSS7	791 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	PPP1R13L	Q8WUF5	828 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	HNRNPLL	Q8WVV9	542 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	ESR2	Q92731	530 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	P2RX5	Q93086	422 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	RILPL2	Q969X0	211 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	MTMR8	Q96EF0	704 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	PURB	Q96QR8	312 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	SCUBE2	Q9NQ36	999 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	RAB23	Q9ULC3	237 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	CCPG1	Q9ULG6	757 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	NOD1	Q9Y239	953 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324		Q9Y3F1	56 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	DDX49	Q9Y6V7	483 aa	Known RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	DOPEY2	Q9Y3R5	2298 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	FRMPD2	Q68DX3	1309 aa	Predicted RBP	7.45	□□□□□ -1.22
CIT-213	ENST00000543324	APC2	O95996	2303 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	LAMA1	P25391	3075 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	WDR81	Q562E7	1941 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ZFHX3	Q15911	3703 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PTPRQ	Q9UMZ3	2332 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	DDX11L8	A8MPP1	907 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324		B4E1Z4	1266 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ZNF213	O14771	459 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	OPLAH	O14841	1288 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	GIPC1	O14908	333 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PER2	O15055	1255 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ATXN7	O15265	892 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	NARS	O43776	548 aa	Known RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	UPP2	O95045	317 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ITGB1	P05556	798 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	SRGAP2B	P0DMP2	458 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	HOXB8	P17481	243 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	TEC	P42680	631 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ALDH5A1	P51649	535 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	MBTPS1	Q14703	1052 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	DUSP6	Q16828	381 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	CCDC96	Q2M329	555 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	SLC35G1	Q2M3R5	365 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	AASDH	Q4L235	1098 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	RRP12	Q5JTH9	1297 aa	Known RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	TMEM63B	Q5T3F8	832 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	STPG1	Q5TH74	334 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	TRAF7	Q6Q0C0	670 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PNMA1	Q8ND90	353 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	RGS22	Q8NE09	1264 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PJA1	Q8NG27	643 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	SPPL3	Q8TCT6	385 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	DHX38	Q92620	1227 aa	Known RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ZFP91	Q96JP5	570 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	CDCA3	Q99618	268 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PDCL3	Q9H2J4	239 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	UPF2	Q9HAU5	1272 aa	Known RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	RC3H2	Q9HBD1	1191 aa	Known RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	VTA1	Q9NP79	307 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	DIAPH3	Q9NSV4	1193 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	POLR3E	Q9NVU0	708 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.44	□□□□□ -1.22
CIT-213	ENST00000543324	CHMP5	Q9NZZ3	219 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	ZSWIM5	Q9P217	1185 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PNMA2	Q9UL42	364 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	UST	Q9Y2C2	406 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	PLXNA4	Q9HCM2	1894 aa		7.44	□□□□□ -1.22
CIT-213	ENST00000543324	SGSM2	O43147	1006 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CFH	P08603	1231 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CYP21A2	P08686	494 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CKB	P12277	381 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CD44	P16070	742 aa	Known RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CHML	P26374	656 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	RPS6	P62753	249 aa	Known RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	IK	Q13123	557 aa	Predicted RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	BAAT	Q14032	418 aa	Predicted RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	IMMT	Q16891	758 aa	Known RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	DUSP28	Q4G0W2	176 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	ASPRV1	Q53RT3	343 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CCDC178	Q5BJE1	867 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	IQSEC1	Q6DN90	963 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CYB5R4	Q7L1T6	521 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	FBXO16	Q8IX29	292 aa	Predicted RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	DBF4B	Q8NFT6	615 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	DNER	Q8NFT8	737 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	IL17RA	Q96F46	866 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	ZKSCAN3	Q9BRR0	538 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	MTG1	Q9BT17	334 aa	Predicted RBP	7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CNNM2	Q9H8M5	875 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	GPCPD1	Q9NPB8	672 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CYP26B1	Q9NR63	512 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	PDGFC	Q9NRA1	345 aa		7.43	□□□□□ -1.22
CIT-213	ENST00000543324	CA14	Q9ULX7	337 aa		7.43	□□□□□ -1.22

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