RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ANO10Q9NW15 660 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 KCND2Q9NZV8 630 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 PTCH2Q9Y6C5 1203 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 KLRC4O43908 158 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 USO1O60763 962 aaKnown RBP11.86□□□□□ -0.51
DDB1-221ENST00000543162 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
DDB1-221ENST00000543162 INHAP05111 366 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 ZNF286BP0CG31 522 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 MARK3P27448 753 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
DDB1-221ENST00000543162 RAD51AP2Q09MP3 1159 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 MORC3Q14149 939 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 KCNB1Q14721 858 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 C1orf186Q6ZWK4 172 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 BBXQ8WY36 941 aaPredicted RBP11.86□□□□□ -0.51
DDB1-221ENST00000543162 DNAJC19Q96DA6 116 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
DDB1-221ENST00000543162 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 CYP26B1Q9NR63 512 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 ERAP1Q9NZ08 941 aa11.86□□□□□ -0.51
DDB1-221ENST00000543162 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
DDB1-221ENST00000543162 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 C6orf222P0C671 652 aaPredicted RBP11.85□□□□□ -0.51
DDB1-221ENST00000543162 GUCY2CP25092 1073 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
DDB1-221ENST00000543162 GIT2Q14161 759 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 PLCB4Q15147 1175 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 FSCN1Q16658 493 aaKnown RBP11.85□□□□□ -0.51
DDB1-221ENST00000543162 DPCR1Q3MIW9 517 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 MTERF2Q49AM1 385 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 ANO6Q4KMQ2 910 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 C16orf70Q9BSU1 422 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 TIPINQ9BVW5 301 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 GTPBP4Q9BZE4 634 aaKnown RBP11.85□□□□□ -0.51
DDB1-221ENST00000543162 UPF3AQ9H1J1 476 aaKnown RBP11.85□□□□□ -0.51
DDB1-221ENST00000543162 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 PTPN22Q9Y2R2 807 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
DDB1-221ENST00000543162 ARID2Q68CP9 1835 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 H3BRB1 525 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 HBP1O60381 514 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 KPNA6O60684 536 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 DGAT1O75907 488 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 FAM13AO94988 1023 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 PGK1P00558 417 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 MYL3P08590 195 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 HSPA8P11142 646 aaKnown RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 GAP43P17677 238 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 BMP6P22004 513 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 RFC5P40937 340 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 GJA9P57773 515 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 BEX3Q00994 111 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 COASYQ13057 564 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 HERC4Q5GLZ8 1057 aaPredicted RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 MLKLQ8NB16 471 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 MCPH1Q8NEM0 835 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 NAT10Q9H0A0 1025 aaKnown RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 DNAJC25Q9H1X3 360 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 TUT1Q9H6E5 874 aaKnown RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 XPNPEP3Q9NQH7 507 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 DDX20Q9UHI6 824 aaKnown RBP11.84□□□□□ -0.51
DDB1-221ENST00000543162 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 PPME1Q9Y570 386 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 COL4A3BPQ9Y5P4 624 aa11.84□□□□□ -0.51
DDB1-221ENST00000543162 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 ZEB2O60315 1214 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 MSCO60682 206 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 HIP1RO75146 1068 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 CAVIN2O95810 425 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.52
DDB1-221ENST00000543162 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
DDB1-221ENST00000543162 PSMD2Q13200 908 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 TARBP2Q15633 366 aaKnown RBP11.83□□□□□ -0.52
DDB1-221ENST00000543162 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 FAM26FQ5R3K3 315 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
DDB1-221ENST00000543162 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 EXOC8Q8IYI6 725 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 DRC1Q96MC2 740 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms