RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 MYH9P35579 1960 aaKnown RBP17.58■□□□□ 0.4
RTN3-211ENST00000542238 TECTAO75443 2155 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 CNTNAP5Q8WYK1 1306 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 hCG_1984214I3L0E3 225 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 MEIS1O00470 390 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 GATMP50440 423 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
RTN3-211ENST00000542238 NECTIN1Q15223 517 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 ZNF713Q8N859 430 aaPredicted RBP17.57■□□□□ 0.4
RTN3-211ENST00000542238 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 ANO2Q9NQ90 1003 aa17.57■□□□□ 0.4
RTN3-211ENST00000542238 COL1A2P08123 1366 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 IGKV6D-21A0A0A0MT36 114 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 SMCO2A6NFE2 343 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 TBKBP1A7MCY6 615 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 DDX39AO00148 427 aaKnown RBP17.56■□□□□ 0.4
RTN3-211ENST00000542238 GPR182O15218 404 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 AP3B2Q13367 1082 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 ZNF484Q5JVG2 852 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 SLC24A5Q71RS6 500 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 NIPA1Q7RTP0 329 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 ATP8B4Q8TF62 1192 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 ADAM2Q99965 735 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 ZNF302Q9NR11 478 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 TLR9Q9NR96 1032 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 RGS18Q9NS28 235 aa17.56■□□□□ 0.4
RTN3-211ENST00000542238 BARX2Q9UMQ3 279 aaPredicted RBP17.56■□□□□ 0.4
RTN3-211ENST00000542238 NOC2LQ9Y3T9 749 aaKnown RBP17.56■□□□□ 0.4
RTN3-211ENST00000542238 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
RTN3-211ENST00000542238 LOC730098B7Z3J9 87 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 SREBF1P36956 1147 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 PKN1Q16512 942 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 RTN1Q16799 776 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 TYW1BQ6NUM6 668 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 MIS18BP1Q6P0N0 1132 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 PDXDC2PQ6P474 469 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 ABHD15Q6UXT9 468 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 TRIM67Q6ZTA4 783 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 BMP8AQ7Z5Y6 402 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 THNSL1Q8IYQ7 743 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 CDCA3Q99618 268 aaPredicted RBP17.55■□□□□ 0.4
RTN3-211ENST00000542238 ST3GAL5Q9UNP4 418 aa17.55■□□□□ 0.4
RTN3-211ENST00000542238 USP15Q9Y4E8 981 aaPredicted RBP17.55■□□□□ 0.4
RTN3-211ENST00000542238 ZBTB43O43298 467 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 MGEA5O60502 916 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 FGF18O76093 207 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 GLP2RO95838 553 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 CCNE2O96020 404 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 SRGAP2BP0DMP2 458 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 PDE12Q6L8Q7 609 aaKnown RBP17.54■□□□□ 0.4
RTN3-211ENST00000542238 PLA2G4DQ86XP0 818 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 CKAP2LQ8IYA6 745 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 PBXIP1Q96AQ6 731 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 PHF7Q9BWX1 381 aaPredicted RBP17.54■□□□□ 0.4
RTN3-211ENST00000542238 CDHR5Q9HBB8 845 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 TMEM260Q9NX78 707 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 PCDHGC5Q9Y5F6 944 aa17.54■□□□□ 0.4
RTN3-211ENST00000542238 TMEM221A6NGB7 291 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 C9IYK1 514 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 M0R296 226 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 PER2O15055 1255 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 CRYBB1P53674 252 aaPredicted RBP17.53■□□□□ 0.4
RTN3-211ENST00000542238 ZXDAP98168 799 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 CBX2Q14781 532 aaPredicted RBP17.53■□□□□ 0.4
RTN3-211ENST00000542238 FAM102BQ5T8I3 360 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 CCDC60Q8IWA6 550 aaPredicted RBP17.53■□□□□ 0.4
RTN3-211ENST00000542238 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
RTN3-211ENST00000542238 TMEM40Q8WWA1 233 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 PRRX2Q99811 253 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 TYW1Q9NV66 732 aaKnown RBP17.53■□□□□ 0.4
RTN3-211ENST00000542238 TCEAL9Q9UHQ7 104 aa17.53■□□□□ 0.4
RTN3-211ENST00000542238 WDFY4Q6ZS81 3184 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 IPO5O00410 1097 aaKnown RBP17.52■□□□□ 0.4
RTN3-211ENST00000542238 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
RTN3-211ENST00000542238 LAG3P18627 525 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 CLK2P49760 499 aaKnown RBP17.52■□□□□ 0.4
RTN3-211ENST00000542238 FUT2Q10981 343 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 DUSP6Q16828 381 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 KIZQ2M2Z5 673 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 METTL13Q8N6R0 699 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 COLGALT1Q8NBJ5 622 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 BBXQ8WY36 941 aaPredicted RBP17.52■□□□□ 0.4
RTN3-211ENST00000542238 RPGRIP1Q96KN7 1286 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 OSMRQ99650 979 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 ELAC1Q9H777 363 aaKnown RBP17.52■□□□□ 0.4
RTN3-211ENST00000542238 TBC1D22BQ9NU19 505 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 TMEM161AQ9NX61 479 aa17.52■□□□□ 0.4
RTN3-211ENST00000542238 PUF60Q9UHX1 559 aaKnown RBP17.52■□□□□ 0.4
RTN3-211ENST00000542238 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
RTN3-211ENST00000542238 GOLGA8BA8MQT2 603 aa17.51■□□□□ 0.39
RTN3-211ENST00000542238 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms