RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 NME8Q8N427 588 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 LEO1Q8WVC0 666 aaPredicted RBP19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 SLC7A3Q8WY07 619 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 LRCH3Q96II8 777 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 RGL1Q9NZL6 768 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 KCND2Q9NZV8 630 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 SEPT9Q9UHD8 586 aaPredicted RBP19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 TUBE1Q9UJT0 475 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 COL6A3P12111 3177 aa19.56■□□□□ 0.72
CLSTN3-210ENST00000540931 GRIN2DO15399 1336 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 MBLAC1A4D2B0 266 aaPredicted RBP19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 ZNF862O60290 1169 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 CLTBP09497 229 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 SPATA31C1P0DKV0 1188 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 TBC1D8BQ0IIM8 1120 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 CTTNQ14247 550 aaKnown RBP19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 IL17AQ16552 155 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 RPAINQ86UA6 219 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 TIPINQ9BVW5 301 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 FTOQ9C0B1 505 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 LRRC27Q9C0I9 530 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 CSRNP2Q9H175 543 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 CYP26B1Q9NR63 512 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 STK17AQ9UEE5 414 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 KCNG1Q9UIX4 513 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 ATP11BQ9Y2G3 1177 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 PCDHA2Q9Y5H9 948 aa19.55■□□□□ 0.72
CLSTN3-210ENST00000540931 PQBP1O60828 265 aaKnown RBP19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 DGAT1O75907 488 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 CD4P01730 458 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 ATP4AP20648 1035 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 ADAM17P78536 824 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 TLE2Q04725 743 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 LRRC26Q2I0M4 334 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 LMBR1Q8WVP7 490 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 CEP170P1Q96L14 293 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 GBP4Q96PP9 640 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 CUEDC2Q9H467 287 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 SETD4Q9NVD3 440 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 KIAA1024Q9UPX6 916 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 ALPK3Q96L96 1907 aa19.54■□□□□ 0.72
CLSTN3-210ENST00000540931 LOXHD1Q8IVV2 1947 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 CUL9Q8IWT3 2517 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 SMIM35A0A1B0GVV1 85 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 A0A1W2PQ27 194 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 A0A1W2PQ64 194 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 A0A1W2PQD8 194 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 PITPNM1O00562 1244 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 MED24O75448 989 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 TARBP2Q15633 366 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 UGCGQ16739 394 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 TRIM60Q495X7 471 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 XKR9Q5GH70 373 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 CLEC17AQ6ZS10 378 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 ANO5Q75V66 913 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 SERINC5Q86VE9 423 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 MCPH1Q8NEM0 835 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 TCP11Q8WWU5 503 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 MAP7D2Q96T17 732 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 GDF15Q99988 308 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 MAGEF1Q9HAY2 307 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 DDX19AQ9NUU7 478 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 PCDHA7Q9UN72 937 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 A0A0C4DFX4 3053 aa19.53■□□□□ 0.72
CLSTN3-210ENST00000540931 ARHGEF35A5YM69 484 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 GOLGA6L22H0YM25 854 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 M0QZ92 97 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 EYA4O95677 639 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 CMA1P23946 247 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 BMP8BP34820 402 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 POLGP54098 1239 aaPredicted RBP19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 RBL2Q08999 1139 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 IER5Q5VY09 327 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 GDF6Q6KF10 455 aaPredicted RBP19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 MTHFD1LQ6UB35 978 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 SYMPKQ92797 1274 aaKnown RBP19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 TMEM39AQ9NV64 488 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 USP25Q9UHP3 1055 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 WDR81Q562E7 1941 aa19.52■□□□□ 0.72
CLSTN3-210ENST00000540931 ASAP2O43150 1006 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 B4GALT4O60513 344 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 MAFO75444 373 aaPredicted RBP19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 KLRC1P26715 233 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 RARRES1P49788 294 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 MTERF2Q49AM1 385 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 RRAGBQ5VZM2 374 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 IQUBQ8NA54 791 aa19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 MMTAG2Q9BU76 263 aaKnown RBP19.51■□□□□ 0.71
CLSTN3-210ENST00000540931 KIAA0355O15063 1070 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 STBD1O95210 358 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 CYP2C9P11712 490 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 IGBP1P78318 339 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 AMPD3Q01432 767 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 FAAP100Q0VG06 881 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 TMEM119Q4V9L6 283 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 ODR4Q5SWX8 454 aa19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 AXDND1Q5T1B0 1012 aaPredicted RBP19.5■□□□□ 0.71
CLSTN3-210ENST00000540931 RESP18Q5W5W9 173 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms