RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 USP20Q9Y2K6 914 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 NR3C1P04150 777 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 XKR9Q5GH70 373 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 TMEM63BQ5T3F8 832 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 ANO5Q75V66 913 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 ZNF720Q7Z2F6 126 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 CCDC60Q8IWA6 550 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-205ENST00000538545 TRIM59Q8IWR1 403 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 PCIF1Q9H4Z3 704 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 TBC1D22BQ9NU19 505 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 GLTPD2A6NH11 291 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 CETN3O15182 167 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 ZSCAN12O43309 604 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 FDX1P10109 184 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 HERVK_113P62684 666 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 ARID5AQ03989 594 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 KCNH2Q12809 1159 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 RRAGAQ7L523 313 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 ERO1BQ86YB8 467 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 DNAJC7Q99615 494 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 MOV10L1Q9BXT6 1211 aaKnown RBP15.55■□□□□ 0.08
ACTN1-205ENST00000538545 SPATC1LQ9H0A9 340 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 ZNF215Q9UL58 517 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-205ENST00000538545 A0A0G2JLL6 359 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-205ENST00000538545 LRRC53A6NM62 1247 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 K7ENM7 598 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 OAZ1P54368 228 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 CYP26C1Q6V0L0 522 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 NIPA1Q7RTP0 329 aa15.55■□□□□ 0.08
ACTN1-205ENST00000538545 PRRT2Q7Z6L0 340 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-205ENST00000538545 CCDC43Q96MW1 224 aaKnown RBP15.55■□□□□ 0.08
ACTN1-205ENST00000538545 SLC26A4O43511 780 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 SLC9A1P19634 815 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 FAM102BQ5T8I3 360 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 LSM14BQ9BX40 385 aaKnown RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 GTPBP4Q9BZE4 634 aaKnown RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.54■□□□□ 0.082e-13■■■■■ 158.6
ACTN1-205ENST00000538545 OLFML3Q9NRN5 406 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 MAP3K20Q9NYL2 800 aaKnown RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 STK24Q9Y6E0 443 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 RCCD1A6NED2 376 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 WDR64B1ANS9 1081 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 ATP2A1O14983 1001 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 CNMDO75829 334 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 FGFR1OPO95684 399 aaKnown RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 NF2P35240 595 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 PEX3P56589 373 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 TRIM14Q14142 442 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 USP50Q70EL3 339 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 TMTC1Q8IUR5 882 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 L3MBTL3Q96JM7 780 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 TRAF3IP3Q9Y228 551 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 EPN1Q9Y6I3 576 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-205ENST00000538545 DUSP10Q9Y6W6 482 aa15.54■□□□□ 0.08
ACTN1-205ENST00000538545 SOWAHBA6NEL2 793 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 SPDYE5A6NIY4 337 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 SLC16A4O15374 487 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 NOL4O94818 638 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 NDUFA10O95299 355 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 POLR2FP61218 127 aaKnown RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 PPATQ06203 517 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 MOGSQ13724 837 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 MYH9P35579 1960 aaKnown RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 LRRN2O75325 713 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 PNMA6AP0CW24 399 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ZNF131P52739 623 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ZNF710Q8N1W2 664 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 CCDC51Q96ER9 411 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 NAA15Q9BXJ9 866 aaKnown RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 NHEJ1Q9H9Q4 299 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 PAXBP1Q9Y5B6 917 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 PDXKO00764 312 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ZNF263O14978 683 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 TRIM49P0CI25 452 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 TRIM49CP0CI26 452 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 FECHP22830 423 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ACTR2P61160 394 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 PSMC5P62195 406 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ZBED6P86452 979 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 EDRF1Q3B7T1 1238 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 CEP63Q96MT8 703 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 JPH1Q9HDC5 661 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-205ENST00000538545 GUCA1BQ9UMX6 200 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 PCDHA10Q9Y5I2 948 aa15.53■□□□□ 0.08
ACTN1-205ENST00000538545 ALDH5A1P51649 535 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-205ENST00000538545 TEX2Q8IWB9 1127 aa15.52■□□□□ 0.08
ACTN1-205ENST00000538545 SYCP3Q8IZU3 236 aa15.52■□□□□ 0.08
ACTN1-205ENST00000538545 BSNDQ8WZ55 320 aa15.52■□□□□ 0.08
ACTN1-205ENST00000538545 BAP1Q92560 729 aa15.52■□□□□ 0.08
ACTN1-205ENST00000538545 FAM84AQ96KN4 292 aa15.52■□□□□ 0.08
ACTN1-205ENST00000538545 CALUO43852 315 aaPredicted RBP15.52■□□□□ 0.07
ACTN1-205ENST00000538545 KIF20AO95235 890 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 GAP43P17677 238 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms