RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 TRAPPC12Q8WVT3 735 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 RNF26Q9BY78 433 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-202ENST00000537358 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-202ENST00000537358 PADI3Q9ULW8 664 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 GINS2Q9Y248 185 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 SAMM50Q9Y512 469 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 KDM3AQ9Y4C1 1321 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 DENND3A2RUS2 1198 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 FAM86B1E9PN63 330 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 RPS6KA5O75582 802 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 DGKIO75912 1065 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 FAM86B2P0C5J1 330 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 CPA1P15085 419 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 NAALADL2Q58DX5 795 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 TCEAL5Q5H9L2 206 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 SWSAP1Q6NVH7 229 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 CPLX2Q6PUV4 134 aaKnown RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 CMTR2Q8IYT2 770 aaKnown RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 BBXQ8WY36 941 aaPredicted RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 KCNB2Q92953 911 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 CLP1Q92989 425 aaKnown RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 PABPC5Q96DU9 382 aaKnown RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 FAM167AQ96KS9 214 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 SLC26A6Q9BXS9 759 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 AGO3Q9H9G7 860 aaKnown RBP11.14□□□□□ -0.63
CCDC170-202ENST00000537358 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 PCDHA10Q9Y5I2 948 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 NID2Q14112 1375 aa11.14□□□□□ -0.63
CCDC170-202ENST00000537358 CPLX1O14810 134 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 GPR182O15218 404 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
CCDC170-202ENST00000537358 CCNE2O96020 404 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 IBSPP21815 317 aaPredicted RBP11.13□□□□□ -0.63
CCDC170-202ENST00000537358 TMOD1P28289 359 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 PRR16Q569H4 304 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 SPOUT1Q5T280 376 aaKnown RBP11.13□□□□□ -0.63
CCDC170-202ENST00000537358 CCDC60Q8IWA6 550 aaPredicted RBP11.13□□□□□ -0.63
CCDC170-202ENST00000537358 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 METTL13Q8N6R0 699 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 P2RX5Q93086 422 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 PHKBQ93100 1093 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 ZNF689Q96CS4 500 aaPredicted RBP11.13□□□□□ -0.63
CCDC170-202ENST00000537358 ZBTB10Q96DT7 871 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 SH3GLB2Q9NR46 395 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 AAASQ9NRG9 546 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 C1orf112Q9NSG2 853 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 CLDND1Q9NY35 253 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
CCDC170-202ENST00000537358 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 WDR64B1ANS9 1081 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 H3BQ06 376 aaPredicted RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 MAGEB2O15479 319 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 NEFLP07196 543 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 IFNAR1P17181 557 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 USP11P51784 963 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 NLRP5P59047 1200 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 SSRP1Q08945 709 aaKnown RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 PAN2Q504Q3 1202 aaKnown RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 TMEM31Q5JXX7 168 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 TRMT1LQ7Z2T5 733 aaKnown RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 GJD3Q8N144 294 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 NEK9Q8TD19 979 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 AGXT2Q9BYV1 514 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 RC3H2Q9HBD1 1191 aaKnown RBP11.12□□□□□ -0.63
CCDC170-202ENST00000537358 NRBP2Q9NSY0 501 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 HCN4Q9Y3Q4 1203 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 CYP46A1Q9Y6A2 500 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 KIAA1671Q9BY89 1806 aa11.12□□□□□ -0.63
CCDC170-202ENST00000537358 MYO7AQ13402 2215 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 GRM6O15303 877 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
CCDC170-202ENST00000537358 GAS7O60861 476 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 MMP1P03956 469 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 SFNP31947 248 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 CIITAP33076 1130 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 CRYBB1P53674 252 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-202ENST00000537358 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
CCDC170-202ENST00000537358 PKN1Q16512 942 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 TMEM266Q2M3C6 531 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 FAM178BQ8IXR5 827 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 KIAA0319LQ8IZA0 1049 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 LINC01599Q8WXQ3 324 aa11.11□□□□□ -0.63
CCDC170-202ENST00000537358 SCLT1Q96NL6 688 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms