RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
UBE3B-206ENST00000536398 CELF4Q9BZC1 486 aaKnown RBP16.09■□□□□ 0.17
UBE3B-206ENST00000536398 TRPV2Q9Y5S1 764 aa16.09■□□□□ 0.17
UBE3B-206ENST00000536398 COL1A2P08123 1366 aa16.09■□□□□ 0.17
UBE3B-206ENST00000536398 EFCAB14O75071 495 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 UPP2O95045 317 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 AMHP03971 560 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 OATP04181 439 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 CD52P31358 61 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 TRIM29Q14134 588 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 RABEP1Q15276 862 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 TMEM266Q2M3C6 531 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 IER5Q5VY09 327 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 BANK1Q8NDB2 785 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 MAFAQ8NHW3 353 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-206ENST00000536398 FAM20AQ96MK3 541 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 RAD9AQ99638 391 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 SH2D3AQ9BRG2 576 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 LLPHQ9BRT6 129 aaKnown RBP16.08■□□□□ 0.16
UBE3B-206ENST00000536398 BRMS1Q9HCU9 246 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-206ENST00000536398 SIP14410 1827 aa16.08■□□□□ 0.16
UBE3B-206ENST00000536398 ENPP3O14638 875 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
UBE3B-206ENST00000536398 CLCN3P51790 818 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 TSHZ1Q6ZSZ6 1077 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-206ENST00000536398 NME8Q8N427 588 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 METTL13Q8N6R0 699 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 USP38Q8NB14 1042 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 RDM1Q8NG50 284 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 TMEM40Q8WWA1 233 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 LINC01599Q8WXQ3 324 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 ARNTL2Q8WYA1 636 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 APBB2Q92870 758 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 TOP1MTQ969P6 601 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 FAM167AQ96KS9 214 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 NRBP2Q9NSY0 501 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 GINS2Q9Y248 185 aa16.07■□□□□ 0.16
UBE3B-206ENST00000536398 MYO9BQ13459 2157 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 M0QZ92 97 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 VTNP04004 478 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 IGFBP4P22692 258 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 PPP2R5CQ13362 524 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 TARBP2Q15633 366 aaKnown RBP16.06■□□□□ 0.16
UBE3B-206ENST00000536398 EFCAB12Q6NXP0 572 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 LINC01465Q8N7H1 131 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 C8orf76Q96K31 380 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 CEP89Q96ST8 783 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 WRAP73Q9P2S5 460 aaPredicted RBP16.06■□□□□ 0.16
UBE3B-206ENST00000536398 PADI3Q9ULW8 664 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 UNC80Q8N2C7 3258 aa16.06■□□□□ 0.16
UBE3B-206ENST00000536398 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 TBX3O15119 743 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 MARCH6O60337 910 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 GPR32O75388 356 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 HTRA4P83105 476 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 PPM1EQ8WY54 764 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 ZNF668Q96K58 619 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 NAP1L4Q99733 375 aaKnown RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 SEPT9Q9UHD8 586 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 MTUS1Q9ULD2 1270 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 MICAL3Q7RTP6 2002 aa16.05■□□□□ 0.16
UBE3B-206ENST00000536398 MYH9P35579 1960 aaKnown RBP16.05■□□□□ 0.16
UBE3B-206ENST00000536398 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 LINC01553A4QN01 128 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 RPLP2P05387 115 aaKnown RBP16.04■□□□□ 0.16
UBE3B-206ENST00000536398 PSMC5P62195 406 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 SPIRE1Q08AE8 756 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 NFX1Q12986 1120 aaKnown RBP16.04■□□□□ 0.16
UBE3B-206ENST00000536398 PAK2Q13177 524 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 DRP2Q13474 957 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-206ENST00000536398 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 ANO5Q75V66 913 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
UBE3B-206ENST00000536398 FAM184AQ8NB25 1140 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 FBXO18Q8NFZ0 1043 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 OSMRQ99650 979 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 TMEM60Q9H2L4 133 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 EVPLQ92817 2033 aa16.04■□□□□ 0.16
UBE3B-206ENST00000536398 SPTBN5Q9NRC6 3674 aaKnown RBP16.04■□□□□ 0.16
UBE3B-206ENST00000536398 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 MAGEB2O15479 319 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms