RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CAMKK2Q96RR4 588 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 NUDT12Q9BQG2 462 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 MMTAG2Q9BU76 263 aaKnown RBP15.24■□□□□ 0.03
LIG1-203ENST00000536218 IDI2Q9BXS1 227 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 KBTBD4Q9NVX7 518 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 RWDD2AQ9UIY3 292 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 SERPINA10Q9UK55 444 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 SCN9AQ15858 1988 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 GLE1Q53GS7 698 aaKnown RBP15.24■□□□□ 0.03
LIG1-203ENST00000536218 RIC8AQ9NPQ8 531 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 RTN3O95197 1032 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 GLI1P08151 1106 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 LINGO3P0C6S8 592 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 FCER1AP12319 257 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 CTCFP49711 727 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 KLHL23Q8NBE8 558 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 DRAXINQ8NBI3 349 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 B4GALNT2Q8NHY0 566 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 TRIM47Q96LD4 638 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 OSBPL9Q96SU4 736 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 RBM12Q9NTZ6 932 aaKnown RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 KCNJ18B7U540 433 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 NCK2O43639 380 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 KLRC4O43908 158 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 HEXIM1O94992 359 aaKnown RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 MYZAPP0CAP1 466 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 PAK2Q13177 524 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 KCNJ12Q14500 433 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 CDC37Q16543 378 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 AK8Q96MA6 479 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 PCMTD1Q96MG8 357 aaPredicted RBP15.23■□□□□ 0.03
LIG1-203ENST00000536218 PCDHGC5Q9Y5F6 944 aa15.23■□□□□ 0.03
LIG1-203ENST00000536218 TRAPPC3O43617 180 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 DNAJC8O75937 253 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 CYLC1P35663 651 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 RNASE9P60153 205 aaKnown RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 TRIM14Q14142 442 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIG1-203ENST00000536218 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 TMEM266Q2M3C6 531 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 RBM26Q5T8P6 1007 aaKnown RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 TTLL6Q8N841 843 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 KCNV2Q8TDN2 545 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 SNX29Q8TEQ0 813 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 EZH1Q92800 747 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 TRIM9Q9C026 710 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 MLXIPQ9HAP2 919 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 EXOC1Q9NV70 894 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 ANO9A1A5B4 782 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 STK4Q13043 487 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 ADSSL1Q8N142 457 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 CCT6BQ92526 530 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 OSBPL1AQ9BXW6 950 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 ZNHIT6Q9NWK9 470 aaKnown RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 hCG_1984214I3L0E3 225 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 AHCYL1O43865 530 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 MOCS3O95396 460 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 TRADDQ15628 312 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 MIGA2Q7L4E1 593 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 KRT26Q7Z3Y9 468 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 ZNF713Q8N859 430 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 RAPGEF5Q92565 580 aa15.22■□□□□ 0.03
LIG1-203ENST00000536218 PRCCQ92733 491 aaPredicted RBP15.22■□□□□ 0.03
LIG1-203ENST00000536218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIG1-203ENST00000536218 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 TACC1O75410 805 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 NDUFB10O96000 172 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 FESP07332 822 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 TCP11X2Q5H9J9 407 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 CWF19L1Q69YN2 538 aaKnown RBP15.21■□□□□ 0.03
LIG1-203ENST00000536218 TMEM179Q6ZVK1 233 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 MRIQ9BWK5 157 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 NYAP2Q9P242 653 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 CAPN6Q9Y6Q1 641 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 PSMA7O14818 248 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 EVI5O60447 810 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 DPEP1P16444 411 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 ATP4AP20648 1035 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 ECE1P42892 770 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 GRB10Q13322 594 aa15.21■□□□□ 0.03
LIG1-203ENST00000536218 BYSLQ13895 437 aaKnown RBP15.21■□□□□ 0.03
LIG1-203ENST00000536218 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.03
LIG1-203ENST00000536218 LACTB2Q53H82 288 aaPredicted RBP15.21■□□□□ 0.03
LIG1-203ENST00000536218 MXRA7P84157 204 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 KRT79Q5XKE5 535 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 WDR59Q6PJI9 974 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 HOMEZQ8IX15 550 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms