RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 SYT1P21579 422 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 EPHA1P21709 976 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CDC25BP30305 580 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 PRKAR1BP31321 381 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SKIV2L2P42285 1042 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 IREB2P48200 963 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 MXI1P50539 228 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 RARSP54136 660 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 GEMIN4P57678 1058 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SNX16P57768 344 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 MRPS35P82673 323 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 AMPD3Q01432 767 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 GUCY1B3Q02153 619 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 RUNX1T1Q06455 604 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SF3B3Q15393 1217 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 MAPRE2Q15555 327 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC40Q4G0X9 1142 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 XP32Q5T750 250 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 TBC1D9BQ66K14 1250 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ALKBH2Q6NS38 261 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 TMEM53Q6P2H8 277 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC62Q6P9F0 684 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 TUBA3EQ6PEY2 450 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 XKR5Q6UX68 686 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ZNF554Q86TJ5 538 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SNX32Q86XE0 403 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 FAM186BQ8IYM0 893 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 USP38Q8NB14 1042 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 EPS8L3Q8TE67 593 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 DYDC1Q8WWB3 177 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 RSAD2Q8WXG1 361 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 GFM2Q969S9 779 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 RELTQ969Z4 430 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ABHD8Q96I13 439 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 C16orf45Q96MC5 204 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SERINC2Q96SA4 455 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CRBNQ96SW2 442 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 POP1Q99575 1024 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 HNRNPABQ99729 332 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC28BQ9BUN5 200 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 PBX4Q9BYU1 374 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 TRIM8Q9BZR9 551 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 DNAI2Q9GZS0 605 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SIL1Q9H173 461 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 SMARCAD1Q9H4L7 1026 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 VIPAS39Q9H9C1 493 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CYP4F11Q9HBI6 524 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 PPP1R14DQ9NXH3 145 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 CTNNAL1Q9UBT7 734 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 DNAI1Q9UI46 699 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 FOXD3Q9UJU5 478 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 PPP2R3BQ9Y5P8 575 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 FADS3Q9Y5Q0 445 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 NR2E3Q9Y5X4 410 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 PRDM15P57071 1507 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ANKRD30AQ9BXX3 1397 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 THOC2Q8NI27 1593 aaKnown RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 LRRD1A4D1F6 860 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 EREGO14944 169 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 MEFVO15553 781 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 B4GALT4O60513 344 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ADAMTS4O75173 837 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 OLFM2O95897 454 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ZFYP08048 801 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 GSTA2P09210 222 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 LINGO3P0C6S8 592 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ALAS1P13196 640 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 GYS1P13807 737 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 PTPN2P17706 415 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 KRT4P19013 534 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 USP5P45974 858 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 TRAPPC10P48553 1259 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 GPC3P51654 580 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ACTN3Q08043 901 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 APOBRQ0VD83 1088 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 SP140Q13342 867 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 NFE2L1Q14494 772 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ADRM1Q16186 407 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 C15orf59Q2T9L4 293 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 KRT71Q3SY84 523 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ARHGAP29Q52LW3 1261 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 SLC44A4Q53GD3 710 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 KIAA1614Q5VZ46 1190 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 HGSNATQ68CP4 663 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 ZNF449Q6P9G9 518 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 UNC5DQ6UXZ4 953 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 CYP26C1Q6V0L0 522 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 HDXQ7Z353 690 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 CABP7Q86V35 215 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 AGGF1Q8N302 714 aaeCLIP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 AADATQ8N5Z0 425 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 NKAIN3Q8N8D7 197 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 GIMAP8Q8ND71 665 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 TOR1AIP2Q8NFQ8 470 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 DQX1Q8TE96 717 aaKnown RBP5.68□□□□□ -1.5
SNHG1-201ENST00000535076 SLC39A13Q96H72 371 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 AGXT2Q9BYV1 514 aa5.68□□□□□ -1.5
SNHG1-201ENST00000535076 FAM192AQ9GZU8 254 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms