RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 C1QL4Q86Z23 238 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 UBE2FQ969M7 185 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 CRELD1Q96HD1 420 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 COX4I2Q96KJ9 171 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 RHOVQ96L33 236 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 TOX2Q96NM4 488 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 ZNF341Q9BYN7 854 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 PTPN22Q9Y2R2 807 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 MYH2Q9UKX2 1941 aa6.38□□□□□ -1.39
ATM-224ENST00000534625 GAKO14976 1311 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 PDS5AQ29RF7 1337 aaKnown RBP6.37□□□□□ -1.39
ATM-224ENST00000534625 PNMA6EA0A0J9YXQ4 647 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 A0A1B0GUL7 405 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 IPO8O15397 1037 aaKnown RBP6.37□□□□□ -1.39
ATM-224ENST00000534625 TLR2O60603 784 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 F13A1P00488 732 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 PF4P02776 101 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 ESR1P03372 595 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 CYP7A1P22680 504 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 PPATQ06203 517 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 PDE4BQ07343 736 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 MOGSQ13724 837 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 DCAF15Q66K64 600 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 ATF7IPQ6VMQ6 1270 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 ZGPATQ8N5A5 531 aaKnown RBP6.37□□□□□ -1.39
ATM-224ENST00000534625 ZNF384Q8TF68 577 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 ARMC5Q96C12 935 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 IDI2Q9BXS1 227 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 ZCCHC17Q9NP64 241 aaKnown RBP6.37□□□□□ -1.39
ATM-224ENST00000534625 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 CEP131Q9UPN4 1083 aa6.37□□□□□ -1.39
ATM-224ENST00000534625 RFX7Q2KHR2 1363 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 ATRNL1Q5VV63 1379 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 NCANO14594 1321 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 PRRG2O14669 202 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 SORBS3O60504 671 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 WDHD1O75717 1129 aaPredicted RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 GNAI2P04899 355 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 RGS3P49796 1198 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 MVPQ14764 893 aaKnown RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 KCNMB1Q16558 191 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 TMEM201Q5SNT2 666 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 NOL9Q5SY16 702 aaKnown RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 C17orf99Q6UX52 265 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 GATAD2BQ8WXI9 593 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 FRAT1Q92837 279 aaPredicted RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 RSRP1Q9BUV0 290 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 ARHGAP39Q9C0H5 1083 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 DUSP15Q9H1R2 295 aaPredicted RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 DDX4Q9NQI0 724 aaKnown RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 FAM53CQ9NYF3 392 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 ABCF2Q9UG63 623 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 POLR3KQ9Y2Y1 108 aaPredicted RBP6.36□□□□□ -1.39
ATM-224ENST00000534625 PTCH2Q9Y6C5 1203 aa6.36□□□□□ -1.39
ATM-224ENST00000534625 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 ADGRA2Q96PE1 1338 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 GPR75-ASB3A0A0A6YYF3 556 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 DDTLA6NHG4 134 aaPredicted RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 PDHXO00330 501 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 CXCL11O14625 94 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 ENTPD3O75355 529 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 PLCG1P19174 1290 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 GARTP22102 1010 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 CTGFP29279 349 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 GDNFP39905 211 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 BTDP43251 543 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 AFMP43652 599 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 RHBDL3P58872 404 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 LACTBP83111 547 aaPredicted RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 MECOMQ03112 1051 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 ARHGEF6Q15052 776 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 SPTY2D1Q68D10 685 aaPredicted RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 ANKRD23Q86SG2 305 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 DZIP1Q86YF9 867 aaKnown RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 TMEM57Q8N5G2 664 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 SPATA5Q8NB90 893 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 ZSCAN18Q8TBC5 510 aaPredicted RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 PIWIL2Q8TC59 973 aaKnown RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
ATM-224ENST00000534625 ZNF333Q96JL9 665 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 NEUROD6Q96NK8 337 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 TMEM74Q96NL1 305 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 HMG20BQ9P0W2 317 aa6.35□□□□□ -1.39
ATM-224ENST00000534625 ZSWIM8A7E2V4 1837 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 MROH7-TTC4A0A0A0MT08 1334 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 TRIOBPQ9H2D6 2365 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 B8ZZF3 427 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 CTNND1O60716 968 aaKnown RBP6.34□□□□□ -1.39
ATM-224ENST00000534625 SRFP11831 508 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 EN2P19622 333 aaPredicted RBP6.34□□□□□ -1.39
ATM-224ENST00000534625 ETV3P41162 512 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 MCAMP43121 646 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 ATP8B2P98198 1209 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 G3BP1Q13283 466 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATM-224ENST00000534625 GAB4Q2WGN9 574 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 ZKSCAN2Q63HK3 967 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms