RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, human

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-215	ENST00000533657	POTEB3	A0JP26	581 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	INHA	P05111	366 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	GUCY2C	P25092	1073 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TCF7	P36402	384 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	NT5DC1	Q5TFE4	455 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	POTEB	Q6S5H4	581 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TLK2	Q86UE8	772 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CEP57L1	Q8IYX8	460 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	GOLGA6L1	Q8N7Z2	621 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SYT2	Q8N9I0	419 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	KLHDC9	Q8NEP7	349 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SPATA20	Q8TB22	786 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	LRRC15	Q8TF66	581 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	LARP4B	Q92615	738 aa	Known RBP	11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	PKD2L1	Q9P0L9	805 aa		11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	DDX20	Q9UHI6	824 aa	Known RBP	11.44	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SCN10A	Q9Y5Y9	1956 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	DDX39A	O00148	427 aa	Known RBP	11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	NOP56	O00567	594 aa	Known RBP	11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CHMP2A	O43633	222 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ADAMTS4	O75173	837 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SLC12A3	P55017	1021 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SATB1	Q01826	763 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	DGKD	Q16760	1214 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	HSDL1	Q3SXM5	330 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	LONRF3	Q496Y0	759 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	BRDT	Q58F21	947 aa	Predicted RBP	11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	XKR3	Q5GH77	459 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ARMC5	Q96C12	935 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	C7orf25	Q9BPX7	421 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TSPY26P	Q9H489	355 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	BCAS3	Q9H6U6	928 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	DNM3	Q9UQ16	869 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	GTPBP6	O43824	516 aa	Predicted RBP	11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ELN	P15502	786 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	AMPD3	Q01432	767 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	PRAMEF19	Q5SWL8	479 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	EXOC8	Q8IYI6	725 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	COPS5	Q92905	334 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	KCNN1	Q92952	543 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TSEN34	Q9BSV6	310 aa	Known RBP	11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	AP5M1	Q9H0R1	490 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	NUP62CL	Q9H1M0	184 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SERTAD1	Q9UHV2	236 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	KIAA1024	Q9UPX6	916 aa		11.43	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SYNRG	Q9UMZ2	1314 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	HAS3	O00219	553 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	F2	P00734	622 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	OAT	P04181	439 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	RARB	P10826	455 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CASQ1	P31415	396 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	UGCG	Q16739	394 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	UVSSA	Q2YD98	709 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	POTEG	Q6S5H5	508 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	OTUD6A	Q7L8S5	288 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	GPATCH11	Q8N954	259 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CNNM3	Q8NE01	707 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	DHX58	Q96C10	678 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	PAGE5	Q96GU1	130 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	C16orf70	Q9BSU1	422 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SEZ6L	Q9BYH1	1024 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	HMX1	Q9NP08	348 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	PAK6	Q9NQU5	681 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	RGL1	Q9NZL6	768 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	GABBR1	Q9UBS5	961 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TSKS	Q9UJT2	592 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ZNF862	O60290	1169 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	LGALS2	P05162	132 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CDC25A	P30304	524 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	STAT5B	P51692	787 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TRIM32	Q13049	653 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TARBP2	Q15633	366 aa	Known RBP	11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TMEM63B	Q5T3F8	832 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SV2B	Q7L1I2	683 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	KCNK18	Q7Z418	384 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ATP8B4	Q8TF62	1192 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	AFG1L	Q8WV93	481 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CEP89	Q96ST8	783 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TMX1	Q9H3N1	280 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	AZI2	Q9H6S1	392 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ERAP1	Q9NZ08	941 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TUBE1	Q9UJT0	475 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ZNF215	Q9UL58	517 aa	Predicted RBP	11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SAMM50	Q9Y512	469 aa		11.42	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	FRMD3	A2A2Y4	597 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ZEB2	O60315	1214 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	TPM3	P06753	285 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	PLA2G4B	P0C869	781 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	ATP4A	P20648	1035 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CCND3	P30281	292 aa	Predicted RBP	11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	YWHAB	P31946	246 aa	Known RBP	11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	PRKCE	Q02156	737 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	CTTN	Q14247	550 aa	Known RBP	11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	SWSAP1	Q6NVH7	229 aa		11.41	□□□□□ -0.58
CAPRIN1-215	ENST00000533657	KATNAL1	Q9BW62	490 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms