RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 SAMD11Q96NU1 681 aa25.13■■□□□ 1.61
BEST1-207ENST00000533521 UIMC1Q96RL1 719 aa25.13■■□□□ 1.61
BEST1-207ENST00000533521 UNC45AQ9H3U1 944 aa25.13■■□□□ 1.61
BEST1-207ENST00000533521 BRMS1Q9HCU9 246 aa25.13■■□□□ 1.61
BEST1-207ENST00000533521 UNC80Q8N2C7 3258 aa25.13■■□□□ 1.61
BEST1-207ENST00000533521 GTPBP6O43824 516 aaPredicted RBP25.12■■□□□ 1.61
BEST1-207ENST00000533521 ZNF862O60290 1169 aa25.12■■□□□ 1.61
BEST1-207ENST00000533521 IGFBP4P22692 258 aa25.12■■□□□ 1.61
BEST1-207ENST00000533521 ZBTB10Q96DT7 871 aa25.12■■□□□ 1.61
BEST1-207ENST00000533521 AGO3Q9H9G7 860 aaKnown RBP25.12■■□□□ 1.61
BEST1-207ENST00000533521 KCNMB3Q9NPA1 279 aa25.12■■□□□ 1.61
BEST1-207ENST00000533521 ENPP3O14638 875 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 OATP04181 439 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 KRT2P35908 639 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 LETM2Q2VYF4 491 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 ARNTL2Q8WYA1 636 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 TNFRSF25Q93038 417 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 LLPHQ9BRT6 129 aaKnown RBP25.11■■□□□ 1.61
BEST1-207ENST00000533521 MTCH2Q9Y6C9 303 aa25.11■■□□□ 1.61
BEST1-207ENST00000533521 RBM25P49756 843 aaKnown RBP25.1■■□□□ 1.61
BEST1-207ENST00000533521 PPP2R5CQ13362 524 aa25.1■■□□□ 1.61
BEST1-207ENST00000533521 MIER3Q7Z3K6 550 aa25.1■■□□□ 1.61
BEST1-207ENST00000533521 LINC01465Q8N7H1 131 aa25.1■■□□□ 1.61
BEST1-207ENST00000533521 ZSCAN31Q96LW9 406 aaPredicted RBP25.1■■□□□ 1.61
BEST1-207ENST00000533521 NIFKQ9BYG3 293 aaKnown RBP25.1■■□□□ 1.61
BEST1-207ENST00000533521 GJB4Q9NTQ9 266 aa25.1■■□□□ 1.61
BEST1-207ENST00000533521 PADI3Q9ULW8 664 aa25.1■■□□□ 1.61
BEST1-207ENST00000533521 PRRC2BQ5JSZ5 2229 aaKnown RBP25.09■■□□□ 1.61
BEST1-207ENST00000533521 EPOPA6NHQ4 379 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 TMOD1P28289 359 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 CRYBB1P53674 252 aaPredicted RBP25.09■■□□□ 1.61
BEST1-207ENST00000533521 PRKCEQ02156 737 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 PIK3AP1Q6ZUJ8 805 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 OXER1Q8TDS5 423 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 YME1L1Q96TA2 773 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 KIF2CQ99661 725 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 TSPYL2Q9H2G4 693 aaPredicted RBP25.09■■□□□ 1.61
BEST1-207ENST00000533521 RNF216Q9NWF9 866 aaPredicted RBP25.09■■□□□ 1.61
BEST1-207ENST00000533521 RALGAPA2Q2PPJ7 1873 aa25.09■■□□□ 1.61
BEST1-207ENST00000533521 SLC37A4O43826 429 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 LPXNO60711 386 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 MMP1P03956 469 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 CD52P31358 61 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 PAK2Q13177 524 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 TARBP2Q15633 366 aaKnown RBP25.08■■□□□ 1.61
BEST1-207ENST00000533521 XKR3Q5GH77 459 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 FAM117BQ6P1L5 589 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 CRIPAKQ8N1N5 446 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 CERS4Q9HA82 394 aa25.08■■□□□ 1.61
BEST1-207ENST00000533521 SH2B1Q9NRF2 756 aaPredicted RBP25.08■■□□□ 1.61
BEST1-207ENST00000533521 CUL9Q8IWT3 2517 aa25.08■■□□□ 1.6
BEST1-207ENST00000533521 CHMP2AO43633 222 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 DKC1O60832 514 aaKnown RBP eCLIP25.07■■□□□ 1.6
BEST1-207ENST00000533521 TMEM62Q0P6H9 643 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 GRB10Q13322 594 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 TRIM29Q14134 588 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 UGCGQ16739 394 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 SLFN12Q8IYM2 578 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 ATXN2LQ8WWM7 1075 aaKnown RBP25.07■■□□□ 1.6
BEST1-207ENST00000533521 SUGCTQ9HAC7 445 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 RC3H2Q9HBD1 1191 aaKnown RBP25.07■■□□□ 1.6
BEST1-207ENST00000533521 VAV3Q9UKW4 847 aa25.07■■□□□ 1.6
BEST1-207ENST00000533521 GPR182O15218 404 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 CCNT1O60563 726 aaKnown RBP25.06■■□□□ 1.6
BEST1-207ENST00000533521 STBD1O95210 358 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 CDC42EP1Q00587 391 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 ST3GAL1Q11201 340 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 GJA10Q969M2 543 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 ZNF689Q96CS4 500 aaPredicted RBP25.06■■□□□ 1.6
BEST1-207ENST00000533521 ERVK-5Q9HDB9 667 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 PPME1Q9Y570 386 aa25.06■■□□□ 1.6
BEST1-207ENST00000533521 COL4A4P53420 1690 aaPredicted RBP25.06■■□□□ 1.6
BEST1-207ENST00000533521 RFXAPO00287 272 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 JAK2O60674 1132 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 GPR32O75388 356 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 UPP2O95045 317 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 PSMC5P62195 406 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 NR5A1Q13285 461 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 EFCAB12Q6NXP0 572 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 RTN4RL1Q86UN2 441 aaPredicted RBP25.05■■□□□ 1.6
BEST1-207ENST00000533521 NPAS4Q8IUM7 802 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 METTL13Q8N6R0 699 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 LINC01599Q8WXQ3 324 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 HAS1Q92839 578 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 MAP7D2Q96T17 732 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 RWDD3Q9Y3V2 267 aa25.05■■□□□ 1.6
BEST1-207ENST00000533521 NLRC5Q86WI3 1866 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 DLL1O00548 723 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 RPS6KA5O75582 802 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 DGKIO75912 1065 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 BAG4O95429 457 aaKnown RBP25.04■■□□□ 1.6
BEST1-207ENST00000533521 STAG3L1P0CL83 205 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 HMGN5P82970 282 aaKnown RBP25.04■■□□□ 1.6
BEST1-207ENST00000533521 TBC1D8BQ0IIM8 1120 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 EARS2Q5JPH6 523 aaKnown RBP25.04■■□□□ 1.6
BEST1-207ENST00000533521 KRT40Q6A162 431 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 SPRED2Q7Z698 418 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 CEP89Q96ST8 783 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 CDHR5Q9HBB8 845 aa25.04■■□□□ 1.6
BEST1-207ENST00000533521 THEGQ9P2T0 379 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms