RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 SREBF1P36956 1147 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 METAP2P50579 478 aaKnown RBP eCLIP17.26■□□□□ 0.35
BRPF3-210ENST00000532538 SMAD4Q13485 552 aaKnown RBP17.26■□□□□ 0.35
BRPF3-210ENST00000532538 ZNF484Q5JVG2 852 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 ATP8B4Q8TF62 1192 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 CCDC12Q8WUD4 166 aaPredicted RBP17.26■□□□□ 0.35
BRPF3-210ENST00000532538 ADAM2Q99965 735 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 ZNF577Q9BSK1 485 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 CCDC196A0A1B0GTZ2 297 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 GPR182O15218 404 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 TBX10O75333 385 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 ATG7O95352 703 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 HMGB1P09429 215 aaKnown RBP17.25■□□□□ 0.35
BRPF3-210ENST00000532538 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 IRS1P35568 1242 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 NRIP1P48552 1158 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 SARSP49591 514 aaKnown RBP17.25■□□□□ 0.35
BRPF3-210ENST00000532538 EXOSC10Q01780 885 aaKnown RBP17.25■□□□□ 0.35
BRPF3-210ENST00000532538 SMAD2Q15796 467 aaKnown RBP17.25■□□□□ 0.35
BRPF3-210ENST00000532538 CTC1Q2NKJ3 1217 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 BMP2KLQ5H9B9 411 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 CCDC60Q8IWA6 550 aaPredicted RBP17.25■□□□□ 0.35
BRPF3-210ENST00000532538 TEX2Q8IWB9 1127 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 SPPL3Q8TCT6 385 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
BRPF3-210ENST00000532538 COL1A2P08123 1366 aa17.25■□□□□ 0.35
BRPF3-210ENST00000532538 KDM3AQ9Y4C1 1321 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 IPO5O00410 1097 aaKnown RBP17.24■□□□□ 0.35
BRPF3-210ENST00000532538 CCNE2O96020 404 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 DNAJB1P25685 340 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 CDC27P30260 824 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 ADAM15Q13444 863 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 COL19A1Q14993 1142 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 NIPA1Q7RTP0 329 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 ADGRD2Q7Z7M1 963 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 OSMRQ99650 979 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 TLE6Q9H808 572 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 C1orf112Q9NSG2 853 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 ST3GAL5Q9UNP4 418 aa17.24■□□□□ 0.35
BRPF3-210ENST00000532538 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 CDC45O75419 566 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 PSAPP07602 524 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 ADD1P35611 737 aaKnown RBP17.23■□□□□ 0.35
BRPF3-210ENST00000532538 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
BRPF3-210ENST00000532538 APOBRQ0VD83 1088 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 PFKFB3Q16875 520 aaPredicted RBP17.23■□□□□ 0.35
BRPF3-210ENST00000532538 KIZQ2M2Z5 673 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 Q6ZUG5 572 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
BRPF3-210ENST00000532538 BBXQ8WY36 941 aaPredicted RBP17.23■□□□□ 0.35
BRPF3-210ENST00000532538 SCLT1Q96NL6 688 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 CDHR5Q9HBB8 845 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 ERVK-5Q9HDB9 667 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 MUTYHQ9UIF7 546 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
BRPF3-210ENST00000532538 IGKV6D-21A0A0A0MT36 114 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 C19orf67A6NJJ6 358 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 MGEA5O60502 916 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 VTNP04004 478 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 CPA1P15085 419 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 GNA11P29992 359 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
BRPF3-210ENST00000532538 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
BRPF3-210ENST00000532538 FUT2Q10981 343 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 CAMK1Q14012 370 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 PRR16Q569H4 304 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 FAM102BQ5T8I3 360 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 SLC24A5Q71RS6 500 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 RNF135Q8IUD6 432 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 KIAA0319LQ8IZA0 1049 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 EFHBQ8N7U6 833 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 RGS18Q9NS28 235 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 GABBR1Q9UBS5 961 aa17.22■□□□□ 0.35
BRPF3-210ENST00000532538 PER2O15055 1255 aa17.21■□□□□ 0.35
BRPF3-210ENST00000532538 ZSCAN20P17040 1043 aaPredicted RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 TMOD1P28289 359 aa17.21■□□□□ 0.35
BRPF3-210ENST00000532538 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
BRPF3-210ENST00000532538 CENPQQ7L2Z9 268 aaPredicted RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 ALYREFQ86V81 257 aaKnown RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 ABI1Q8IZP0 508 aa17.21■□□□□ 0.35
BRPF3-210ENST00000532538 RNF169Q8NCN4 708 aa17.21■□□□□ 0.35
BRPF3-210ENST00000532538 BRF1Q92994 677 aa17.21■□□□□ 0.35
BRPF3-210ENST00000532538 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
BRPF3-210ENST00000532538 TLR9Q9NR96 1032 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms