RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 NIFKQ9BYG3 293 aaKnown RBP13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 CSRNP2Q9H175 543 aa13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 RCOR1Q9UKL0 485 aa13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
PPFIA1-220ENST00000532024 WDR81Q562E7 1941 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 MBLAC1A4D2B0 266 aaPredicted RBP13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 PP2D1A8MPX8 630 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 GAS2O43903 313 aaKnown RBP13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 MED24O75448 989 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 SPATA31C1P0DKV0 1188 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 CYP2C9P11712 490 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 RAG1P15918 1043 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 ATP4AP20648 1035 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 FAAP100Q0VG06 881 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 ANO5Q75V66 913 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 PPP1R13LQ8WUF5 828 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 HIPK3Q9H422 1215 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 CYP26B1Q9NR63 512 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 DDX19AQ9NUU7 478 aaKnown RBP13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
PPFIA1-220ENST00000532024 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 SMIM35A0A1B0GVV1 85 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 ARHGEF35A5YM69 484 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 M0QZ92 97 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 KIAA0355O15063 1070 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 TREHO43280 583 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 KLRC1P26715 233 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 CDC25AP30304 524 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 MTHFD1LQ6UB35 978 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 TRAPPC12Q8WVT3 735 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 WRAP73Q9P2S5 460 aaPredicted RBP13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 TBX21Q9UL17 535 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 PCDHA2Q9Y5H9 948 aa13.2□□□□□ -0.3
PPFIA1-220ENST00000532024 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 DGAT1O75907 488 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 PARNO95453 639 aaKnown RBP13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 C22orf31O95567 290 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 THPOP40225 353 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 ADAM17P78536 824 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 TARBP2Q15633 366 aaKnown RBP13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 HYIQ5T013 277 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 MARCH8Q5T0T0 291 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 NME8Q8N427 588 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 NOC4LQ9BVI4 516 aaKnown RBP13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
PPFIA1-220ENST00000532024 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 MAFO75444 373 aaPredicted RBP13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 STBD1O95210 358 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 EYA4O95677 639 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 TIMP1P01033 207 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 SELPP16109 830 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 RARRES1P49788 294 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 NPEPPSP55786 919 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 CDC42EP1Q00587 391 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 GRIN1Q05586 938 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 RBL2Q08999 1139 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 IER5Q5VY09 327 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 MCPH1Q8NEM0 835 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 MMTAG2Q9BU76 263 aaKnown RBP13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 FAM49AQ9H0Q0 323 aaPredicted RBP13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 ATP6V0A4Q9HBG4 840 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 AKT3Q9Y243 479 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
PPFIA1-220ENST00000532024 CEP290O15078 2479 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 TMEM150BA6NC51 233 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 PLCG1P19174 1290 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms