RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ZNF277Q9NRM2 450 aaPredicted RBP3.91□□□□□ -1.78
CD44-234ENST00000531873 USP36Q9P275 1121 aaKnown RBP3.91□□□□□ -1.78
CD44-234ENST00000531873 MSRAQ9UJ68 235 aa3.91□□□□□ -1.78
CD44-234ENST00000531873 INVSQ9Y283 1065 aa3.91□□□□□ -1.78
CD44-234ENST00000531873 PCDHB4Q9Y5E5 795 aa3.91□□□□□ -1.78
CD44-234ENST00000531873 FITM1A5D6W6 292 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 KLHL33A6NCF5 533 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 GOLGA6CA6NDK9 693 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 GOLGA6BA6NDN3 693 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 ELL2O00472 640 aaPredicted RBP3.9□□□□□ -1.79
CD44-234ENST00000531873 FOXP2O15409 715 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 SRGAP3O43295 1099 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 MAFKO60675 156 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 HPXP02790 462 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 KRT18P05783 430 aaKnown RBP3.9□□□□□ -1.79
CD44-234ENST00000531873 MMEP08473 750 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 DBHP09172 617 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 CLEC2LP0C7M8 214 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 GOLGA6DP0CG33 693 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 OSMP13725 252 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 AGXTP21549 392 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 C5AR1P21730 350 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 ENPP1P22413 925 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 CYP2C19P33261 490 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 GALK1P51570 392 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 SRSF2Q01130 221 aaKnown RBP3.9□□□□□ -1.79
CD44-234ENST00000531873 GTF2H3Q13889 308 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 GBX1Q14549 363 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 SLC14A2Q15849 920 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 FSCN1Q16658 493 aaKnown RBP3.9□□□□□ -1.79
CD44-234ENST00000531873 SYCP2LQ5T4T6 812 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 BTBD8Q5XKL5 378 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 CYB5RLQ6IPT4 315 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 SLC4A10Q6U841 1118 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 KCNK18Q7Z418 384 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 AMIGO3Q86WK7 504 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 AMOTL1Q8IY63 956 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 LRRC56Q8IYG6 542 aaPredicted RBP3.9□□□□□ -1.79
CD44-234ENST00000531873 ARRDC4Q8NCT1 418 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 TTLL11Q8NHH1 800 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 ASB15Q8WXK1 588 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 SEC14L1Q92503 715 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 RUNDC1Q96C34 613 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 CLIP3Q96DZ5 547 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 PPP1R16BQ96T49 567 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 SLC12A5Q9H2X9 1139 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 POFUT1Q9H488 388 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 PRDM12Q9H4Q4 367 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 RIC8BQ9NVN3 520 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 GOLGA6AQ9NYA3 693 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.9□□□□□ -1.79
CD44-234ENST00000531873 BTBD7Q9P203 1132 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 DDX20Q9UHI6 824 aaKnown RBP3.9□□□□□ -1.79
CD44-234ENST00000531873 ADAMTS6Q9UKP5 1117 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 PALD1Q9ULE6 856 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 MRFAP1Q9Y605 127 aa3.9□□□□□ -1.79
CD44-234ENST00000531873 LOC102724159A0A0B4J2E5 919 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 A0A1W2PQ27 194 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 A0A1W2PQ64 194 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 A0A1W2PQC6 194 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 A0A1W2PQD8 194 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 PRAMEF25A6NGN4 478 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 LRRC10BA6NIK2 292 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 IL33O95760 270 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 U2AF1L5P0DN76 240 aaPredicted RBP3.89□□□□□ -1.79
CD44-234ENST00000531873 ZSCAN22P10073 491 aaPredicted RBP3.89□□□□□ -1.79
CD44-234ENST00000531873 AOAHP28039 575 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 TRHRP34981 398 aaPredicted RBP3.89□□□□□ -1.79
CD44-234ENST00000531873 HERVK_113P62684 666 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 CYP4F8P98187 520 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 U2AF1Q01081 240 aaKnown RBP eCLIP3.89□□□□□ -1.79
CD44-234ENST00000531873 GRM3Q14832 879 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 MYBPC3Q14896 1274 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 PWP2Q15269 919 aaKnown RBP3.89□□□□□ -1.79
CD44-234ENST00000531873 CLUL1Q15846 466 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 MINDY4Q4G0A6 757 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 CT83Q5H943 113 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 PITRM1Q5JRX3 1037 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 RRP12Q5JTH9 1297 aaKnown RBP3.89□□□□□ -1.79
CD44-234ENST00000531873 TOR2AQ5JU69 321 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 EFCAB2Q5VUJ9 269 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 BICRALQ6AI39 1079 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 EP400NLQ6ZTU2 488 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 EXOC8Q8IYI6 725 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 C7orf31Q8N865 590 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 FLAD1Q8NFF5 587 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 LRGUKQ96M69 825 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 RPS6KC1Q96S38 1066 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 PCGF6Q9BYE7 350 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 QRSL1Q9H0R6 528 aaKnown RBP3.89□□□□□ -1.79
CD44-234ENST00000531873 C19orf44Q9H6X5 657 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 PRDM11Q9NQV5 511 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 DNAJC28Q9NX36 388 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 SERPINB13Q9UIV8 391 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 TUBD1Q9UJT1 453 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 TMPRSS11EQ9UL52 423 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 NUB1Q9Y5A7 615 aa3.89□□□□□ -1.79
CD44-234ENST00000531873 PRSS38A1L453 326 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 PLIN1O60240 522 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 MPIG6BO95866 241 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms