RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 EDIL3O43854 480 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 PSAPP07602 524 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 TOB2Q14106 344 aaPredicted RBP17.89■□□□□ 0.45
CPSF1-205ENST00000531042 TMEM266Q2M3C6 531 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 CKAP2LQ8IYA6 745 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 LENG9Q96B70 501 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 LMAN2LQ9H0V9 348 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 CDHR5Q9HBB8 845 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 SH3GLB2Q9NR46 395 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 PCDHA10Q9Y5I2 948 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 WDR81Q562E7 1941 aa17.89■□□□□ 0.45
CPSF1-205ENST00000531042 GRM6O15303 877 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 C22orf31O95567 290 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 STAG3L1P0CL83 205 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 COL9A1P20849 921 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 NFX1Q12986 1120 aaKnown RBP17.88■□□□□ 0.45
CPSF1-205ENST00000531042 COL19A1Q14993 1142 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 FAM43BQ6ZT52 329 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-205ENST00000531042 CMTR2Q8IYT2 770 aaKnown RBP17.88■□□□□ 0.45
CPSF1-205ENST00000531042 NEK9Q8TD19 979 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 PABPC5Q96DU9 382 aaKnown RBP17.88■□□□□ 0.45
CPSF1-205ENST00000531042 ERVK-5Q9HDB9 667 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 GABBR1Q9UBS5 961 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 TCEAL9Q9UHQ7 104 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 GINS2Q9Y248 185 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 NOC2LQ9Y3T9 749 aaKnown RBP17.88■□□□□ 0.45
CPSF1-205ENST00000531042 KIAA1671Q9BY89 1806 aa17.88■□□□□ 0.45
CPSF1-205ENST00000531042 RPS6KA5O75582 802 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 USP11P51784 963 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 TRMT1LQ7Z2T5 733 aaKnown RBP17.87■□□□□ 0.45
CPSF1-205ENST00000531042 TMEM40Q8WWA1 233 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 PLVAPQ9BX97 442 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 C1QTNF1Q9BXJ1 281 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 SAMM50Q9Y512 469 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 CYP46A1Q9Y6A2 500 aa17.87■□□□□ 0.45
CPSF1-205ENST00000531042 MRPL42Q9Y6G3 142 aaKnown RBP17.87■□□□□ 0.45
CPSF1-205ENST00000531042 H3BQ06 376 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-205ENST00000531042 MSH4O15457 936 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 MGEA5O60502 916 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 SARSP49591 514 aaKnown RBP17.86■□□□□ 0.45
CPSF1-205ENST00000531042 NLRP5P59047 1200 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
CPSF1-205ENST00000531042 PUS10Q3MIT2 529 aaKnown RBP17.86■□□□□ 0.45
CPSF1-205ENST00000531042 ODR4Q5SWX8 454 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 PTCRAQ6ISU1 281 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-205ENST00000531042 FAM178BQ8IXR5 827 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 P2RX5Q93086 422 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 ZNF274Q96GC6 653 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-205ENST00000531042 TM6SF1Q9BZW5 370 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 EPHX3Q9H6B9 360 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 CD320Q9NPF0 282 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 LRFN2Q9ULH4 789 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 CEP131Q9UPN4 1083 aa17.86■□□□□ 0.45
CPSF1-205ENST00000531042 GRXCR2A6NFK2 248 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 WDR64B1ANS9 1081 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 GPR182O15218 404 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 NCK2O43639 380 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 GPR32O75388 356 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 MMP1P03956 469 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 IL9P15248 144 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 CRYBB1P53674 252 aaPredicted RBP17.85■□□□□ 0.45
CPSF1-205ENST00000531042 MYO7AQ13402 2215 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 KIZQ2M2Z5 673 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 PAN2Q504Q3 1202 aaKnown RBP17.85■□□□□ 0.45
CPSF1-205ENST00000531042 NAALADL2Q58DX5 795 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 METTL13Q8N6R0 699 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 KHSRPQ92945 711 aaKnown RBP eCLIP17.85■□□□□ 0.45
CPSF1-205ENST00000531042 FAM167AQ96KS9 214 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 PPP1R16BQ96T49 567 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 RIT2Q99578 217 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 LARP6Q9BRS8 491 aaKnown RBP17.85■□□□□ 0.45
CPSF1-205ENST00000531042 ALG13Q9NP73 1137 aaKnown RBP17.85■□□□□ 0.45
CPSF1-205ENST00000531042 DISC1Q9NRI5 854 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 RGS18Q9NS28 235 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 PCDHA4Q9UN74 947 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 PLAGL2Q9UPG8 496 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
CPSF1-205ENST00000531042 MAGEB2O15479 319 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 ZNF862O60290 1169 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 DEXIO95424 95 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 VTNP04004 478 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 GATMP50440 423 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 CAMK1Q14012 370 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 EP400NLQ6ZTU2 488 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 TBCKQ8TEA7 893 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 SLC5A5Q92911 643 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 OSMRQ99650 979 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 ADAM2Q99965 735 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 UPF3BQ9BZI7 483 aaKnown RBP17.84■□□□□ 0.45
CPSF1-205ENST00000531042 C1orf112Q9NSG2 853 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 CLDND1Q9NY35 253 aa17.84■□□□□ 0.45
CPSF1-205ENST00000531042 FNDC1Q4ZHG4 1894 aaPredicted RBP17.84■□□□□ 0.45
CPSF1-205ENST00000531042 DENND3A2RUS2 1198 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 C9IYK1 514 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 M0R2N6 131 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 CPLX1O14810 134 aa17.83■□□□□ 0.44
CPSF1-205ENST00000531042 GAS7O60861 476 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms