RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 PPP1R42Q7Z4L9 355 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 RERGLQ9H628 205 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 CHMP1AQ9HD42 196 aaPredicted RBP13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 ING3Q9NXR8 418 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 SENP1Q9P0U3 644 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 OCLNQ16625 522 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 ANO4Q32M45 955 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 PASD1Q8IV76 773 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 NR1I2O75469 434 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 SESN2P58004 480 aaPredicted RBP13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 RNASE11Q8TAA1 199 aaKnown RBP13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 HIC2Q96JB3 615 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 KDRP35968 1356 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 HIC1Q14526 733 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 NUP93Q8N1F7 819 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 FAM129AQ9BZQ8 928 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 UNC45AQ9H3U1 944 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 ETNK1Q9HBU6 452 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 SCGNO76038 276 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 ZSWIM7Q19AV6 140 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 FAM133AQ8N9E0 248 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 TCHHQ07283 1943 aa13.51□□□□□ -0.25
PDE4DIP-227ENST00000529945 RASA4BC9J798 803 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 COPEO14579 308 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 RASA4O43374 803 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 SCN3BQ9NY72 215 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 RALBP11234 206 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 CCDC141Q6ZP82 1450 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 ATP6V1B1P15313 513 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 RCN1Q15293 331 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 LAYNQ6UX15 382 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 GALNT4Q8N4A0 578 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 FAM45AQ8TCE6 357 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 COG1Q8WTW3 980 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 MYCLP12524 364 aaPredicted RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 LRRC74AQ0VAA2 488 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 DTX3LQ8TDB6 740 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 PSMC3P17980 439 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 PDAP1Q13442 181 aaKnown RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 BLZF1Q9H2G9 400 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 GTF2A1LQ9UNN4 478 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 ATPIF1Q9UII2 106 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 CUTAO60888 179 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 NFIL3Q16649 462 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 CASS4Q9NQ75 786 aa13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
PDE4DIP-227ENST00000529945 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 SERPINH1P50454 418 aaKnown RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 LONP2Q86WA8 852 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 RIN3Q8TB24 985 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 ELF1P32519 619 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 WBP11Q9Y2W2 641 aaKnown RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 NPM3O75607 178 aaKnown RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 PLOD1Q02809 727 aaPredicted RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 THOC7Q6I9Y2 204 aaKnown RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 TRIM51Q9BSJ1 452 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 ZCWPW1Q9H0M4 648 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 AZI2Q9H6S1 392 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 ERFP50548 548 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 CENPUQ71F23 418 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 SUPT20HQ8NEM7 779 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 ST5P78524 1137 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 ZWILCHQ9H900 591 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 HESX1Q9UBX0 185 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 TALDO1P37837 337 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 TRIP13Q15645 432 aaPredicted RBP13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 PAG1Q9NWQ8 432 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 CLCA2Q9UQC9 943 aa13.49□□□□□ -0.25
PDE4DIP-227ENST00000529945 RSBN1Q5VWQ0 802 aaPredicted RBP13.48□□□□□ -0.25
PDE4DIP-227ENST00000529945 DDIASQ8IXT1 998 aa13.48□□□□□ -0.25
PDE4DIP-227ENST00000529945 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
PDE4DIP-227ENST00000529945 AREL1O15033 823 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms