RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 RTN1Q16799 776 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 HERC4Q5GLZ8 1057 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-207ENST00000528932 FAM102BQ5T8I3 360 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 RNF20Q5VTR2 975 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 JAKMIP3Q5VZ66 844 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 SGMS1Q86VZ5 419 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 SKAP1Q86WV1 359 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 EFHBQ8N7U6 833 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 TMEM40Q8WWA1 233 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 ADAM2Q99965 735 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
TRIM3-207ENST00000528932 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-207ENST00000528932 DENND3A2RUS2 1198 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 MEIS1O00470 390 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 CENPBP07199 599 aaPredicted RBP14.28□□□□□ -0.12
TRIM3-207ENST00000528932 SARSP49591 514 aaKnown RBP14.28□□□□□ -0.12
TRIM3-207ENST00000528932 NAALADL2Q58DX5 795 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 FAM160B1Q5W0V3 765 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 PDXDC2PQ6P474 469 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 PLA2G4DQ86XP0 818 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 CCDC60Q8IWA6 550 aaPredicted RBP14.28□□□□□ -0.12
TRIM3-207ENST00000528932 CKAP2LQ8IYA6 745 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 NME8Q8N427 588 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 TLE6Q9H808 572 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 ZNF302Q9NR11 478 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 RBM28Q9NW13 759 aaKnown RBP14.28□□□□□ -0.12
TRIM3-207ENST00000528932 KDM3AQ9Y4C1 1321 aa14.28□□□□□ -0.12
TRIM3-207ENST00000528932 USP15Q9Y4E8 981 aaPredicted RBP14.28□□□□□ -0.12
TRIM3-207ENST00000528932 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 FAM86B1E9PN63 330 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ZBTB43O43298 467 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 HBP1O60381 514 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 CDC45O75419 566 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ATG7O95352 703 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 EYA4O95677 639 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 VTNP04004 478 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 FAM86B2P0C5J1 330 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 FGFR1P11362 822 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 SREBF1P36956 1147 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ERVFC1P60507 584 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 APOBRQ0VD83 1088 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 FUT2Q10981 343 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 KIZQ2M2Z5 673 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 SWSAP1Q6NVH7 229 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ABHD15Q6UXT9 468 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 THNSL1Q8IYQ7 743 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 KIAA0319LQ8IZA0 1049 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 SMRP1Q8NCR6 262 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 EDAQ92838 391 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 RPGRIP1Q96KN7 1286 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 MFSD14AQ96MC6 490 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 NEK1Q96PY6 1258 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 OSMRQ99650 979 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 APOL5Q9BWW9 433 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 PCDHB12Q9Y5F1 795 aa14.27□□□□□ -0.13
TRIM3-207ENST00000528932 IGKV6D-21A0A0A0MT36 114 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 TMEM221A6NGB7 291 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 ZBTB42B2RXF5 422 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 M0R296 226 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 FGF18O76093 207 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 FOSP01100 380 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-207ENST00000528932 ATP4AP20648 1035 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 COASYQ13057 564 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 PLPP4Q5VZY2 271 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 FAM228AQ86W67 206 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 METTL13Q8N6R0 699 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 COLGALT1Q8NBJ5 622 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 VN1R2Q8NFZ6 395 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 ZNF668Q96K58 619 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-207ENST00000528932 PHOX2BQ99453 314 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 TLR9Q9NR96 1032 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 RGS18Q9NS28 235 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 TYW1Q9NV66 732 aaKnown RBP14.26□□□□□ -0.13
TRIM3-207ENST00000528932 BARHL2Q9NY43 387 aa14.26□□□□□ -0.13
TRIM3-207ENST00000528932 KLF18A0A0U1RQI7 1052 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 LOC730098B7Z3J9 87 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 C9IYK1 514 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 SP100P23497 879 aaPredicted RBP14.25□□□□□ -0.13
TRIM3-207ENST00000528932 CDC27P30260 824 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 CLK2P49760 499 aaKnown RBP14.25□□□□□ -0.13
TRIM3-207ENST00000528932 SLC26A2P50443 739 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 EXOSC10Q01780 885 aaKnown RBP14.25□□□□□ -0.13
TRIM3-207ENST00000528932 AP3B2Q13367 1082 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 ZNF484Q5JVG2 852 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 LLGL2Q6P1M3 1020 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 TRIM67Q6ZTA4 783 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 PBXIP1Q96AQ6 731 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 ZNF577Q9BSK1 485 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
TRIM3-207ENST00000528932 C1orf112Q9NSG2 853 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms