RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TSHZ1Q6ZSZ6 1077 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 FAM20AQ96MK3 541 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 YME1L1Q96TA2 773 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 CELF4Q9BZC1 486 aaKnown RBP16.09■□□□□ 0.17
CAPN1-216ENST00000528739 SUGCTQ9HAC7 445 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 SEPT9Q9UHD8 586 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-216ENST00000528739 MTUS1Q9ULD2 1270 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 INSL6Q9Y581 213 aa16.09■□□□□ 0.17
CAPN1-216ENST00000528739 KAT6AQ92794 2004 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 LCHNA4D1U4 455 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 DDX11L8A8MPP1 907 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 RFXAPO00287 272 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 MAGEB2O15479 319 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 HMGN5P82970 282 aaKnown RBP16.08■□□□□ 0.16
CAPN1-216ENST00000528739 TAP1Q03518 808 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 ST3GAL1Q11201 340 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 PAK2Q13177 524 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 UGCGQ16739 394 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 NCAPH2Q6IBW4 605 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 EFCAB12Q6NXP0 572 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 BANK1Q8NDB2 785 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 RDM1Q8NG50 284 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 ETNPPLQ8TBG4 499 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 MBOAT7Q96N66 472 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 SCLT1Q96NL6 688 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 MAP7D2Q96T17 732 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 KIF2CQ99661 725 aa16.08■□□□□ 0.16
CAPN1-216ENST00000528739 LLPHQ9BRT6 129 aaKnown RBP16.08■□□□□ 0.16
CAPN1-216ENST00000528739 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-216ENST00000528739 ZNF862O60290 1169 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 VTNP04004 478 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 CLCN3P51790 818 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 KIAA0319LQ8IZA0 1049 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 USP38Q8NB14 1042 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
CAPN1-216ENST00000528739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-216ENST00000528739 DKC1O60832 514 aaKnown RBP eCLIP16.06■□□□□ 0.16
CAPN1-216ENST00000528739 RPS6KA5O75582 802 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 ARHGEF15O94989 841 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 C22orf31O95567 290 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 CALCRLQ16602 461 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 KIZQ2M2Z5 673 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 XKR3Q5GH77 459 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 SLFN12Q8IYM2 578 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 TOP1MTQ969P6 601 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 ZNF668Q96K58 619 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-216ENST00000528739 SH2D3AQ9BRG2 576 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 AGO3Q9H9G7 860 aaKnown RBP16.06■□□□□ 0.16
CAPN1-216ENST00000528739 PADI3Q9ULW8 664 aa16.06■□□□□ 0.16
CAPN1-216ENST00000528739 ZBTB42B2RXF5 422 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 EML1O00423 815 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 ENPP3O14638 875 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 TBX3O15119 743 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 PSMC5P62195 406 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 ADGRE1Q14246 886 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
CAPN1-216ENST00000528739 TGS1Q96RS0 853 aaKnown RBP16.05■□□□□ 0.16
CAPN1-216ENST00000528739 OSMRQ99650 979 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 FTHL17Q9BXU8 183 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 KCNMB3Q9NPA1 279 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 LRFN2Q9ULH4 789 aa16.05■□□□□ 0.16
CAPN1-216ENST00000528739 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
CAPN1-216ENST00000528739 DENND3A2RUS2 1198 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 TMEM150BA6NC51 233 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 GPR182O15218 404 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 NEMFO60524 1076 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 MCM7P33993 719 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 TXKP42681 527 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
CAPN1-216ENST00000528739 DNM2P50570 870 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 CRYBB1P53674 252 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-216ENST00000528739 NLRP11P59045 1033 aaKnown RBP16.04■□□□□ 0.16
CAPN1-216ENST00000528739 PPP2R5CQ13362 524 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 NLRP7Q8WX94 980 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 HAS1Q92839 578 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 PCDHA12Q9UN75 941 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 NOC2LQ9Y3T9 749 aaKnown RBP16.04■□□□□ 0.16
CAPN1-216ENST00000528739 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 SQORQ9Y6N5 450 aa16.04■□□□□ 0.16
CAPN1-216ENST00000528739 LINC01553A4QN01 128 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
CAPN1-216ENST00000528739 CYP4A11Q02928 519 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 EPHA7Q15375 998 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 PLA2G4FQ68DD2 849 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 SPRED2Q7Z698 418 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.03■□□□□ 0.16
CAPN1-216ENST00000528739 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 DYDC2Q96IM9 177 aa16.03■□□□□ 0.16
CAPN1-216ENST00000528739 VAV3Q9UKW4 847 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms