RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 EPOPA6NHQ4 379 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 PSMD10O75832 226 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 SFNP31947 248 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 PRKCEQ02156 737 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 UGCGQ16739 394 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 MOXD1Q6UVY6 613 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 USP38Q8NB14 1042 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 FAM167AQ96KS9 214 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 CELF4Q9BZC1 486 aaKnown RBP17.52■□□□□ 0.4
CAPN1-213ENST00000527897 AGO3Q9H9G7 860 aaKnown RBP17.52■□□□□ 0.4
CAPN1-213ENST00000527897 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 INSL6Q9Y581 213 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 ZNF862O60290 1169 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 OATP04181 439 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 MKRN4PQ13434 485 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-213ENST00000527897 EARS2Q5JPH6 523 aaKnown RBP17.51■□□□□ 0.39
CAPN1-213ENST00000527897 ETNPPLQ8TBG4 499 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 NRBP2Q9NSY0 501 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 CEP131Q9UPN4 1083 aa17.51■□□□□ 0.39
CAPN1-213ENST00000527897 REV3LO60673 3130 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 LINC01553A4QN01 128 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 GTPBP6O43824 516 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-213ENST00000527897 C22orf31O95567 290 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 VTNP04004 478 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 CLCN3P51790 818 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 NFX1Q12986 1120 aaKnown RBP17.5■□□□□ 0.39
CAPN1-213ENST00000527897 PAK2Q13177 524 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 TMEM266Q2M3C6 531 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 KRT40Q6A162 431 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 KIAA0319LQ8IZA0 1049 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 NME8Q8N427 588 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 GDPD5Q8WTR4 605 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 TOP1MTQ969P6 601 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 MBOAT7Q96N66 472 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 SEPT9Q9UHD8 586 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-213ENST00000527897 PADI3Q9ULW8 664 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 AKT3Q9Y243 479 aa17.5■□□□□ 0.39
CAPN1-213ENST00000527897 BTBD18B2RXH4 712 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 MMP1P03956 469 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 GCFC2P16383 781 aaKnown RBP17.49■□□□□ 0.39
CAPN1-213ENST00000527897 KIZQ2M2Z5 673 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 EFCAB12Q6NXP0 572 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 DIS3L2Q8IYB7 885 aaKnown RBP17.49■□□□□ 0.39
CAPN1-213ENST00000527897 LRRC71Q8N4P6 559 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 BANK1Q8NDB2 785 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 TGS1Q96RS0 853 aaKnown RBP17.49■□□□□ 0.39
CAPN1-213ENST00000527897 SUGCTQ9HAC7 445 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 CDHR5Q9HBB8 845 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 PRDM6Q9NQX0 595 aa17.49■□□□□ 0.39
CAPN1-213ENST00000527897 COL4A4P53420 1690 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-213ENST00000527897 TMEM150BA6NC51 233 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 ENPP3O14638 875 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 HTRA4P83105 476 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-213ENST00000527897 SKIV2LQ15477 1246 aaKnown RBP17.48■□□□□ 0.39
CAPN1-213ENST00000527897 MTERF2Q49AM1 385 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 PPP4R3AQ6IN85 833 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 RDM1Q8NG50 284 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 ZNF668Q96K58 619 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-213ENST00000527897 OSMRQ99650 979 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 KIF2CQ99661 725 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 NAP1L4Q99733 375 aaKnown RBP17.48■□□□□ 0.39
CAPN1-213ENST00000527897 SH2D3AQ9BRG2 576 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 C17orf80Q9BSJ5 609 aa17.48■□□□□ 0.39
CAPN1-213ENST00000527897 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
CAPN1-213ENST00000527897 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 MAGEB2O15479 319 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 TMOD1P28289 359 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 TBC1D8BQ0IIM8 1120 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 GRB10Q13322 594 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 NCAPH2Q6IBW4 605 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 C8orf76Q96K31 380 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-213ENST00000527897 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 SCLT1Q96NL6 688 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 MAP7D2Q96T17 732 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 NOC2LQ9Y3T9 749 aaKnown RBP17.47■□□□□ 0.39
CAPN1-213ENST00000527897 SQORQ9Y6N5 450 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 PRRC2BQ5JSZ5 2229 aaKnown RBP17.47■□□□□ 0.39
CAPN1-213ENST00000527897 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
CAPN1-213ENST00000527897 EML1O00423 815 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 DLL1O00548 723 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 BAG4O95429 457 aaKnown RBP17.46■□□□□ 0.39
CAPN1-213ENST00000527897 NLRP11P59045 1033 aaKnown RBP17.46■□□□□ 0.39
CAPN1-213ENST00000527897 ERVK-21P61565 698 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
CAPN1-213ENST00000527897 XKR3Q5GH77 459 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 B3GNT9Q6UX72 402 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 FAM184AQ8NB25 1140 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 FBXO22Q8NEZ5 403 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 LINC01599Q8WXQ3 324 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 HAS1Q92839 578 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 TNFRSF25Q93038 417 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 FTHL17Q9BXU8 183 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms