RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 LETM2Q2VYF4 491 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 PIK3AP1Q6ZUJ8 805 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 NEK8Q86SG6 692 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 ETNPPLQ8TBG4 499 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 DDX25Q9UHL0 483 aaKnown RBP18.18■□□□□ 0.5
CTSB-213ENST00000527215 COL4A6Q14031 1691 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 SLC37A4O43826 429 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 UPP2O95045 317 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 C22orf31O95567 290 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 JAK3P52333 1124 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 HTRA4P83105 476 aaPredicted RBP18.17■□□□□ 0.5
CTSB-213ENST00000527215 UGCGQ16739 394 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 MIER3Q7Z3K6 550 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 NME8Q8N427 588 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 TOP1MTQ969P6 601 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 FAM167AQ96KS9 214 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 CELF4Q9BZC1 486 aaKnown RBP18.17■□□□□ 0.5
CTSB-213ENST00000527215 AGO3Q9H9G7 860 aaKnown RBP18.17■□□□□ 0.5
CTSB-213ENST00000527215 INSL6Q9Y581 213 aa18.17■□□□□ 0.5
CTSB-213ENST00000527215 PRRC2BQ5JSZ5 2229 aaKnown RBP18.17■□□□□ 0.5
CTSB-213ENST00000527215 ATG2AQ2TAZ0 1938 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 LINC01553A4QN01 128 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 ZNF862O60290 1169 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 OATP04181 439 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 CD52P31358 61 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 KRT2P35908 639 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 FOSBP53539 338 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 MRPS5P82675 430 aaKnown RBP18.16■□□□□ 0.5
CTSB-213ENST00000527215 PRKCEQ02156 737 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 NR5A1Q13285 461 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 CCDC85BQ15834 202 aaPredicted RBP18.16■□□□□ 0.5
CTSB-213ENST00000527215 EARS2Q5JPH6 523 aaKnown RBP18.16■□□□□ 0.5
CTSB-213ENST00000527215 KIAA0319LQ8IZA0 1049 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 KIF2CQ99661 725 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 MTUS1Q9ULD2 1270 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 CEP131Q9UPN4 1083 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 SQORQ9Y6N5 450 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 VCANP13611 3396 aa18.16■□□□□ 0.5
CTSB-213ENST00000527215 FAM205CA6NFA0 338 aa18.15■□□□□ 0.5
CTSB-213ENST00000527215 GTPBP6O43824 516 aaPredicted RBP18.15■□□□□ 0.5
CTSB-213ENST00000527215 B3GNT9Q6UX72 402 aa18.15■□□□□ 0.5
CTSB-213ENST00000527215 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
CTSB-213ENST00000527215 BRMS1Q9HCU9 246 aa18.15■□□□□ 0.5
CTSB-213ENST00000527215 PRDM6Q9NQX0 595 aa18.15■□□□□ 0.5
CTSB-213ENST00000527215 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
CTSB-213ENST00000527215 TNFRSF10AO00220 468 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 CCNT1O60563 726 aaKnown RBP18.14■□□□□ 0.49
CTSB-213ENST00000527215 GCFC2P16383 781 aaKnown RBP18.14■□□□□ 0.49
CTSB-213ENST00000527215 ERVK-21P61565 698 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 PAK2Q13177 524 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 PPP4R3AQ6IN85 833 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 CCDC83Q8IWF9 413 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
CTSB-213ENST00000527215 TNFRSF25Q93038 417 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 ASB2Q96Q27 587 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 TGS1Q96RS0 853 aaKnown RBP18.14■□□□□ 0.49
CTSB-213ENST00000527215 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 YME1L1Q96TA2 773 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 KCNMB3Q9NPA1 279 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 GINS2Q9Y248 185 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 MTCH2Q9Y6C9 303 aa18.14■□□□□ 0.49
CTSB-213ENST00000527215 ENPP3O14638 875 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 MMP1P03956 469 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 GRB10Q13322 594 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 TRIM29Q14134 588 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 TMEM266Q2M3C6 531 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 KRT40Q6A162 431 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 GDPD5Q8WTR4 605 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 FAM20AQ96MK3 541 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 NAP1L4Q99733 375 aaKnown RBP18.13■□□□□ 0.49
CTSB-213ENST00000527215 CDHR5Q9HBB8 845 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 VAV3Q9UKW4 847 aa18.13■□□□□ 0.49
CTSB-213ENST00000527215 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 MAGEB2O15479 319 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 LPXNO60711 386 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 VTNP04004 478 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 POU3F3P20264 500 aaPredicted RBP18.12■□□□□ 0.49
CTSB-213ENST00000527215 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
CTSB-213ENST00000527215 CLCN3P51790 818 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 AAK1Q2M2I8 961 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 EFCAB12Q6NXP0 572 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 RTN4RL1Q86UN2 441 aaPredicted RBP18.12■□□□□ 0.49
CTSB-213ENST00000527215 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 DIS3L2Q8IYB7 885 aaKnown RBP18.12■□□□□ 0.49
CTSB-213ENST00000527215 LRRC71Q8N4P6 559 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 C17orf80Q9BSJ5 609 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 FTHL17Q9BXU8 183 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
CTSB-213ENST00000527215 SEPT9Q9UHD8 586 aaPredicted RBP18.12■□□□□ 0.49
CTSB-213ENST00000527215 EML1O00423 815 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms