RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 METTL14Q9HCE5 456 aaKnown RBP19.27■□□□□ 0.68
USH1C-205ENST00000527020 FRMPD4Q14CM0 1322 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 GAS7O60861 476 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 EPB41P11171 864 aaKnown RBP19.27■□□□□ 0.68
USH1C-205ENST00000527020 RPL13P26373 211 aaKnown RBP19.27■□□□□ 0.68
USH1C-205ENST00000527020 ZC2HC1CQ53FD0 456 aaPredicted RBP19.27■□□□□ 0.68
USH1C-205ENST00000527020 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 MS4A14Q96JA4 679 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 HINFPQ9BQA5 517 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 UNC45AQ9H3U1 944 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 MRPL11Q9Y3B7 192 aaKnown RBP19.27■□□□□ 0.68
USH1C-205ENST00000527020 TBC1D12O60347 775 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 FAM13AO94988 1023 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 TNNT3P45378 269 aaPredicted RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 NAP1L1P55209 391 aaKnown RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 KIAA0753Q2KHM9 967 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 MYCT1Q8N699 235 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 FAM71BQ8TC56 605 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 AENQ8WTP8 325 aaKnown RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 GDAP1L1Q96MZ0 367 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 SELENOOQ9BVL4 669 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 LUC7LQ9NQ29 371 aaKnown RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 PSD3Q9NYI0 1048 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 PGAP2Q9UHJ9 254 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 TSKSQ9UJT2 592 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 SYF2O95926 243 aaKnown RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 ZNF131P52739 623 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 JAM2P57087 298 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 MRPS25P82663 173 aaKnown RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 NFIL3Q16649 462 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 LDHDQ86WU2 507 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 KSR1Q8IVT5 923 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 VEZTQ9HBM0 779 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
USH1C-205ENST00000527020 FBXL5Q9UKA1 691 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 PCDHB13Q9Y5F0 798 aa19.26■□□□□ 0.67
USH1C-205ENST00000527020 FER1L6Q2WGJ9 1857 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 FTCDO95954 541 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 CAP2P40123 477 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 MATR3P43243 847 aaKnown RBP eCLIP19.25■□□□□ 0.67
USH1C-205ENST00000527020 COG2Q14746 738 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 MEI1Q5TIA1 1274 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 TCERG1LQ5VWI1 586 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 FAM160B2Q86V87 743 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 SPAG5Q96R06 1193 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 PSMD1Q99460 953 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 PARVGQ9HBI0 331 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 MED4Q9NPJ6 270 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 RBM12Q9NTZ6 932 aaKnown RBP19.25■□□□□ 0.67
USH1C-205ENST00000527020 NENFQ9UMX5 172 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 GRID2IPA4D2P6 1211 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 BTNL10A8MVZ5 291 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 PRKCIP41743 596 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 CCDC181Q5TID7 509 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 GBP6Q6ZN66 633 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 LARGE2Q8N3Y3 721 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 RUBCNQ92622 972 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 ZNF577Q9BSK1 485 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 PDGFDQ9GZP0 370 aaPredicted RBP19.25■□□□□ 0.67
USH1C-205ENST00000527020 GCNT4Q9P109 453 aa19.25■□□□□ 0.67
USH1C-205ENST00000527020 SHTN1A0MZ66 631 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 GTPBP10A4D1E9 387 aaKnown RBP19.24■□□□□ 0.67
USH1C-205ENST00000527020 MUTP22033 750 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 SLC7A5Q01650 507 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 GJB7Q6PEY0 223 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
USH1C-205ENST00000527020 ZNF720Q7Z2F6 126 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 TTLL6Q8N841 843 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 DEFB129Q9H1M3 183 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 ACBD3Q9H3P7 528 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 FEM1BQ9UK73 627 aa19.24■□□□□ 0.67
USH1C-205ENST00000527020 BZW2Q9Y6E2 419 aaKnown RBP19.24■□□□□ 0.67
USH1C-205ENST00000527020 PAFAH1B1P43034 410 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 PTGER2P43116 358 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 CCDC70Q6NSX1 233 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 DNAAF5Q86Y56 855 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 RTKN2Q8IZC4 609 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 NACC1Q96RE7 527 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 WDR11Q9BZH6 1224 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 EHMT1Q9H9B1 1298 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 PACSIN2Q9UNF0 486 aaPredicted RBP19.23■□□□□ 0.67
USH1C-205ENST00000527020 ZNF536O15090 1300 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 PHACTR2O75167 634 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 HSD17B4P51659 736 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 SETQ01105 290 aaPredicted RBP19.23■□□□□ 0.67
USH1C-205ENST00000527020 FAM186BQ8IYM0 893 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 OLIG1Q8TAK6 271 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 AGBL1Q96MI9 1066 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 NAGPAQ9UK23 515 aa19.23■□□□□ 0.67
USH1C-205ENST00000527020 ITGB5P18084 799 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 KCNA3P22001 575 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 INPP5BP32019 993 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 CFAP221Q4G0U5 840 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 HSP90B2PQ58FF3 399 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 C10orf76Q5T2E6 689 aa19.22■□□□□ 0.67
USH1C-205ENST00000527020 FAM83AQ86UY5 434 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms