RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 LRRC31Q6UY01 552 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 TRIM59Q8IWR1 403 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 RUSC1Q9BVN2 902 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 CEP72Q9P209 647 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 FAM153AQ9UHL3 310 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 EML1O00423 815 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 SERPING1P05155 500 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ZC2HC1CQ53FD0 456 aaPredicted RBP13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 SLC12A3P55017 1021 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 GIT2Q14161 759 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ARL8AQ96BM9 186 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 CENPHQ9H3R5 247 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 MED4Q9NPJ6 270 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ZNRF3Q9ULT6 936 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 KCNK3O14649 394 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 AKAP3O75969 853 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 TUBBP07437 444 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 TCP1P17987 556 aaKnown RBP13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 HOXD13P35453 343 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 NT5C2P49902 561 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 AP1M1Q9BXS5 423 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 KRT14P02533 472 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 VIL1P09327 827 aaKnown RBP13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 MCM3P25205 808 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 INPP5BP32019 993 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 COG2Q14746 738 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 KCNMB3Q9NPA1 279 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 STIM2Q9P246 746 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
CHMP1B-201ENST00000526991 KDM3AQ9Y4C1 1321 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 HEXIM1O94992 359 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ZNF571Q7Z3V5 609 aaPredicted RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 MYOZ2Q9NPC6 264 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ABCB11O95342 1321 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 MSH4O15457 936 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 GCFC2P16383 781 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 SATB1Q01826 763 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ADAT2Q7Z6V5 191 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 MMGT1Q8N4V1 131 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 RRP15Q9Y3B9 282 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 MYO1CO00159 1063 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 ENTPD3O75355 529 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 SP4Q02446 784 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 CIAPIN1Q6FI81 312 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 MKL1Q969V6 931 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 GMLQ99445 158 aa13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 SEPT11Q9NVA2 429 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-201ENST00000526991 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 TULP2O00295 520 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 CEP104O60308 925 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 GFPT2O94808 682 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 LCA5LO95447 670 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 ALAS1P13196 640 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 HDLBPQ00341 1268 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 SLC18A3Q16572 532 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms