RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 C4orf32Q8N8J7 132 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 PCDHB6Q9Y5E3 794 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 TMEM150BA6NC51 233 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 GRXCR1A8MXD5 290 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 SLITRK3O94933 977 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 OR52Z1P0C646 297 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 PDCP20941 246 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 TMEM62Q0P6H9 643 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 CTTNQ14247 550 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 TARBP2Q15633 366 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 PLEKHG4Q58EX7 1191 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 METTL13Q8N6R0 699 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 DBF4BQ8NFT6 615 aa18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 EIF2AK1Q9BQI3 630 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-202ENST00000526433 BAIAP3O94812 1187 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 TECP42680 631 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 CYP4A11Q02928 519 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 PTGDRQ13258 359 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 IKBKEQ14164 716 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 MTERF2Q49AM1 385 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 RILPL1Q5EBL4 403 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 EFCAB12Q6NXP0 572 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 ANO5Q75V66 913 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 TPH2Q8IWU9 490 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 C4orf19Q8IY42 314 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 SEPT8Q92599 483 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 SH2D3AQ9BRG2 576 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 CELF4Q9BZC1 486 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 ZSWIM4Q9H7M6 989 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 WRAP73Q9P2S5 460 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 LOXHD1Q8IVV2 1947 aa18.19■□□□□ 0.5
SSSCA1-202ENST00000526433 ABHD14A-ACY1A0A1B0GW23 586 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 M0QZ92 97 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 SYT1P21579 422 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 TBC1D8BQ0IIM8 1120 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 LPIN1Q14693 890 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 CEP89Q96ST8 783 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 LXNQ9BS40 222 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 SUGCTQ9HAC7 445 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 TRPV2Q9Y5S1 764 aa18.18■□□□□ 0.5
SSSCA1-202ENST00000526433 VPS37CA5D8V6 355 aaPredicted RBP18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 POTEMA6NI47 508 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 GHRP10912 638 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 TMOD1P28289 359 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 CLCN3P51790 818 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 FBXO47Q5MNV8 452 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 LRRC71Q8N4P6 559 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 LINC01465Q8N7H1 131 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 NEK9Q8TD19 979 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
SSSCA1-202ENST00000526433 ZBTB39O15060 712 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 EFCAB14O75071 495 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 VTNP04004 478 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 ATP2A2P16615 1042 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 YWHABP31946 246 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 KCNJ6P48051 423 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 NPEPPSP55786 919 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 WDR5P61964 334 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 PLA2G4FQ68DD2 849 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 OTUD6AQ7L8S5 288 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 ZNF579Q8NAF0 562 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 PHOSPHO2Q8TCD6 241 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 AGO3Q9H9G7 860 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 CYP26B1Q9NR63 512 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 SQORQ9Y6N5 450 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
SSSCA1-202ENST00000526433 SIP14410 1827 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 LAD1O00515 517 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 MAFO75444 373 aaPredicted RBP18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 LYPLA2O95372 231 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 PBX2P40425 430 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 RABGGTBP53611 331 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 PDIA5Q14554 519 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 XKR9Q5GH70 373 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 APBB2Q92870 758 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 CEP170P1Q96L14 293 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 SLC9A7Q96T83 725 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 PBX4Q9BYU1 374 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 AKT3Q9Y243 479 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 GINS2Q9Y248 185 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 SZT2Q5T011 3432 aa18.15■□□□□ 0.5
SSSCA1-202ENST00000526433 A0A087WWV3 80 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 GPR32O75388 356 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 SPATA31C1P0DKV0 1188 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms