RNA–Protein interactions for RNA: ENST00000526060.5

SYVN1-206, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYVN1, Length 3,144 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-206ENST00000526060 H2AFVQ71UI9 128 aa12.34□□□□□ -0.43
SYVN1-206ENST00000526060 SYCE1Q8N0S2 351 aa12.34□□□□□ -0.43
SYVN1-206ENST00000526060 SYT2Q8N9I0 419 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-206ENST00000526060 TPCN2Q8NHX9 752 aa12.34□□□□□ -0.43
SYVN1-206ENST00000526060 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
SYVN1-206ENST00000526060 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
SYVN1-206ENST00000526060 KRIT1O00522 736 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 HPDP32754 393 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■■□ 19.8
SYVN1-206ENST00000526060 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 MBOAT7Q96N66 472 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 REEP2Q9BRK0 252 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 DONSONQ9NYP3 566 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 FBXL5Q9UKA1 691 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 MEIS1O00470 390 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 RPA1P27694 616 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 PTPROQ16827 1216 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 PRR16Q569H4 304 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 N4BP2L2Q92802 583 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 TYW1Q9NV66 732 aaKnown RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 SUGT1Q9Y2Z0 365 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 AKAP3O75969 853 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 ECHS1P30084 290 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 PSMC6P62333 389 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 ARHGAP4P98171 946 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 MTMR3Q13615 1198 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 EPHA7Q15375 998 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 EPM2AIP1Q7L775 607 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-206ENST00000526060 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 CCDC26Q8TAB7 109 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 CABS1Q96KC9 395 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 CCT8L2Q96SF2 557 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
SYVN1-206ENST00000526060 A0A0A6YYK5 440 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 E7EVH7 732 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 TBX3O15119 743 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 NR3C1P04150 777 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 GSCP56915 257 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 DAAM2Q86T65 1068 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.447e-6■■■□□ 15.5
SYVN1-206ENST00000526060 DNAAF5Q86Y56 855 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 SUCLA2Q9P2R7 463 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 BTAF1O14981 1849 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 FAM107AO95990 144 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 FERP16591 822 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 SEC24CP53992 1094 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 SPIRE1Q08AE8 756 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 BIRC3Q13489 604 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 YTHDF3Q7Z739 585 aaKnown RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 ETNPPLQ8TBG4 499 aa12.32□□□□□ -0.44
SYVN1-206ENST00000526060 UBLCP1Q8WVY7 318 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-206ENST00000526060 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 NEBLO76041 1014 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 GCNT3O95395 438 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 HOXD13P35453 343 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 E2F5Q15329 346 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 SLFN11Q7Z7L1 901 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 RASGEF1CQ8N431 466 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 U2AF1L4Q8WU68 220 aaKnown RBP12.31□□□□□ -0.44
SYVN1-206ENST00000526060 SLC35C1Q96A29 364 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 SCLT1Q96NL6 688 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.31□□□□□ -0.44
SYVN1-206ENST00000526060 MEIS2O14770 477 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 SERPINB2P05120 415 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 NF2P35240 595 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 NPEPPSP55786 919 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 ODF2Q5BJF6 829 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 OR2W6PQ8NHA6 318 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 PPANQ9NQ55 473 aaKnown RBP12.31□□□□□ -0.44
SYVN1-206ENST00000526060 AMACRQ9UHK6 382 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
SYVN1-206ENST00000526060 H0YGN5 161 aa12.31□□□□□ -0.44
SYVN1-206ENST00000526060 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms