RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ACRV1P26436 265 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 CD83Q01151 205 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 HGFACQ04756 655 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 FHL2Q14192 279 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 TM4SF20Q53R12 229 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 LRSAM1Q6UWE0 723 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 IL17DQ8TAD2 202 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 IPO9Q96P70 1041 aaKnown RBP6.52□□□□□ -1.37
CSDE1-210ENST00000525878 OR10A5Q9H207 317 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 OR10A2Q9H208 303 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 Q9UFV3 132 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 CDC42EP3Q9UKI2 254 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 MRPS23Q9Y3D9 190 aaKnown RBP6.52□□□□□ -1.37
CSDE1-210ENST00000525878 ZNF202O95125 648 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 MMEP08473 750 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 MRE11P49959 708 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 DGCR2P98153 550 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 FSTL4Q6MZW2 842 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 EP400NLQ6ZTU2 488 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 ZC3H7AQ8IWR0 971 aaKnown RBP6.51□□□□□ -1.37
CSDE1-210ENST00000525878 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 ZNF808Q8N4W9 903 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-210ENST00000525878 GSTCDQ8NEC7 633 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 CACTINQ8WUQ7 758 aaKnown RBP6.51□□□□□ -1.37
CSDE1-210ENST00000525878 ASB15Q8WXK1 588 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 C12orf65Q9H3J6 166 aaKnown RBP6.51□□□□□ -1.37
CSDE1-210ENST00000525878 NELFAQ9H3P2 528 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 UCKL1Q9NWZ5 548 aa6.51□□□□□ -1.37
CSDE1-210ENST00000525878 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-210ENST00000525878 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-210ENST00000525878 DNM2P50570 870 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 TGFB2P61812 414 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 MOGSQ13724 837 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 LSM12Q3MHD2 195 aaKnown RBP6.5□□□□□ -1.37
CSDE1-210ENST00000525878 OTOP2Q7RTS6 562 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 FILIP1Q7Z7B0 1213 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 C1orf210Q8IVY1 113 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 DLG3Q92796 817 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 SLC52A2Q9HAB3 445 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 PLA2G3Q9NZ20 509 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 SIRPGQ9P1W8 387 aa6.5□□□□□ -1.37
CSDE1-210ENST00000525878 RASSF10A6NK89 507 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 C1SP09871 688 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 SDHAP31040 664 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 ZC3H6P61129 1189 aaKnown RBP6.49□□□□□ -1.37
CSDE1-210ENST00000525878 PURAQ00577 322 aaKnown RBP6.49□□□□□ -1.37
CSDE1-210ENST00000525878 SERINC3Q13530 473 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 TRIM61Q5EBN2 209 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 ZC3H12BQ5HYM0 836 aaKnown RBP6.49□□□□□ -1.37
CSDE1-210ENST00000525878 CELF4Q9BZC1 486 aaKnown RBP6.49□□□□□ -1.37
CSDE1-210ENST00000525878 ZNF703Q9H7S9 590 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-210ENST00000525878 KCNH7Q9NS40 1196 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 ASB1Q9Y576 335 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 B3GALT1Q9Y5Z6 326 aa6.49□□□□□ -1.37
CSDE1-210ENST00000525878 MSX2P35548 267 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-210ENST00000525878 MEOX1P50221 254 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 RASA3Q14644 834 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 GRAMD4Q6IC98 578 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 OVCH1Q7RTY7 1134 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 LRP10Q7Z4F1 713 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 BCL6BQ8N143 479 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-210ENST00000525878 CISD2Q8N5K1 135 aaKnown RBP6.48□□□□□ -1.37
CSDE1-210ENST00000525878 GBP4Q96PP9 640 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 CSRNP2Q9H175 543 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 TLR9Q9NR96 1032 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 KDM2BQ8NHM5 1336 aa6.48□□□□□ -1.37
CSDE1-210ENST00000525878 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 SCDO00767 359 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 SLC26A4O43511 780 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 EFCAB14O75071 495 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 MCM7P33993 719 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 DPTQ07507 201 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 GRM7Q14831 915 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 FNDC7Q5VTL7 733 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 ADGRE4PQ86SQ3 457 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 SLC7A14Q8TBB6 771 aa6.47□□□□□ -1.37
CSDE1-210ENST00000525878 AGO3Q9H9G7 860 aaKnown RBP6.47□□□□□ -1.37
CSDE1-210ENST00000525878 AURKAIP1Q9NWT8 199 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-210ENST00000525878 PRAMEF22A3QJZ6 481 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 GOLGA6L22H0YM25 854 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 FOXP2O15409 715 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 KCNQ2O43526 872 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 KCNA6P17658 529 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 HIBADHP31937 336 aaKnown RBP6.46□□□□□ -1.38
CSDE1-210ENST00000525878 RTKN2Q8IZC4 609 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 JMYQ8N9B5 988 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 OR14K1Q8NGZ2 314 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 CHFRQ96EP1 664 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 SCLYQ96I15 445 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 PLEKHG4BQ96PX9 1271 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 NDOR1Q9UHB4 597 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 COQ6Q9Y2Z9 468 aa6.46□□□□□ -1.38
CSDE1-210ENST00000525878 WDR33Q9C0J8 1336 aaKnown RBP6.46□□□□□ -1.38
CSDE1-210ENST00000525878 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
CSDE1-210ENST00000525878 RASGRP1O95267 797 aa6.45□□□□□ -1.38
CSDE1-210ENST00000525878 RBM25P49756 843 aaKnown RBP6.45□□□□□ -1.38
CSDE1-210ENST00000525878 STAT5BP51692 787 aa6.45□□□□□ -1.38
CSDE1-210ENST00000525878 CATSPEREQ5SY80 951 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms