RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 WDFY4Q6ZS81 3184 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 ZNF318Q5VUA4 2279 aa29.55■■■□□ 2.32
PVT1-219ENST00000523427 ERVK-5Q9HDB9 667 aa29.55■■■□□ 2.32
PVT1-219ENST00000523427 RIC8AQ9NPQ8 531 aa29.55■■■□□ 2.32
PVT1-219ENST00000523427 KDM3AQ9Y4C1 1321 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 TMEM221A6NGB7 291 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 M0R296 226 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 CCNE2O96020 404 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 ADCY7P51828 1080 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 COASYQ13057 564 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 TRIM67Q6ZTA4 783 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 TMEM40Q8WWA1 233 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 AAASQ9NRG9 546 aa29.54■■■□□ 2.32
PVT1-219ENST00000523427 HBP1O60381 514 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 THNSL1Q8IYQ7 743 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 KIAA0319LQ8IZA0 1049 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 TCEANC2Q96MN5 208 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 PHOX2BQ99453 314 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 ANO2Q9NQ90 1003 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 ST3GAL5Q9UNP4 418 aa29.53■■■□□ 2.32
PVT1-219ENST00000523427 V9GY48 417 aaPredicted RBP29.53■■■□□ 2.32
PVT1-219ENST00000523427 CNTNAP5Q8WYK1 1306 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 SMCO2A6NFE2 343 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 LOC730098B7Z3J9 87 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 FGF18O76093 207 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 FOSP01100 380 aaPredicted RBP29.52■■■□□ 2.32
PVT1-219ENST00000523427 ERVFC1P60507 584 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 IER5LQ5T953 404 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 FAM160B1Q5W0V3 765 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 PDXDC2PQ6P474 469 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 TLR9Q9NR96 1032 aa29.52■■■□□ 2.32
PVT1-219ENST00000523427 TYW1Q9NV66 732 aaKnown RBP29.52■■■□□ 2.32
PVT1-219ENST00000523427 MEIS1O00470 390 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 ATG7O95352 703 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 CCDC60Q8IWA6 550 aaPredicted RBP29.51■■■□□ 2.31
PVT1-219ENST00000523427 CKAP2LQ8IYA6 745 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 ATP8B4Q8TF62 1192 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 ESYT1Q9BSJ8 1104 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 APOL5Q9BWW9 433 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 ZNF302Q9NR11 478 aa29.51■■■□□ 2.31
PVT1-219ENST00000523427 FGFR1P11362 822 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 SLC26A2P50443 739 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 ZXDAP98168 799 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 APOBRQ0VD83 1088 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 NECTIN1Q15223 517 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 RTN1Q16799 776 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 KIZQ2M2Z5 673 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 SWSAP1Q6NVH7 229 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 ABHD15Q6UXT9 468 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 SLC24A5Q71RS6 500 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 SGMS1Q86VZ5 419 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 PLA2G4DQ86XP0 818 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 SUGP1Q8IWZ8 645 aaKnown RBP29.5■■■□□ 2.31
PVT1-219ENST00000523427 PRSS33Q8NF86 280 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 VN1R2Q8NFZ6 395 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 OSMRQ99650 979 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 PHF7Q9BWX1 381 aaPredicted RBP29.5■■■□□ 2.31
PVT1-219ENST00000523427 RGS18Q9NS28 235 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 C1orf112Q9NSG2 853 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 PLXNA4Q9HCM2 1894 aa29.5■■■□□ 2.31
PVT1-219ENST00000523427 JAKMIP3Q5VZ66 844 aa29.49■■■□□ 2.31
PVT1-219ENST00000523427 APOA5Q6Q788 366 aa29.49■■■□□ 2.31
PVT1-219ENST00000523427 METTL13Q8N6R0 699 aa29.49■■■□□ 2.31
PVT1-219ENST00000523427 COLGALT1Q8NBJ5 622 aa29.49■■■□□ 2.31
PVT1-219ENST00000523427 ATP6V0A4Q9HBG4 840 aa29.49■■■□□ 2.31
PVT1-219ENST00000523427 RBM28Q9NW13 759 aaKnown RBP29.49■■■□□ 2.31
PVT1-219ENST00000523427 IGKV6D-21A0A0A0MT36 114 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 GPR182O15218 404 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 VTNP04004 478 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 SREBF1P36956 1147 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 UBE3AQ05086 875 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 ZNF484Q5JVG2 852 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 PLPP4Q5VZY2 271 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 PPP1R18Q6NYC8 613 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 MIS18BP1Q6P0N0 1132 aa29.48■■■□□ 2.31
PVT1-219ENST00000523427 NAP1L2Q9ULW6 460 aaPredicted RBP29.48■■■□□ 2.31
PVT1-219ENST00000523427 C9IYK1 514 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 SP100P23497 879 aaPredicted RBP29.47■■■□□ 2.31
PVT1-219ENST00000523427 DUSP6Q16828 381 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 ODR4Q5SWX8 454 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 LLGL2Q6P1M3 1020 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 BMP8AQ7Z5Y6 402 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 NEK1Q96PY6 1258 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 RNF216Q9NWF9 866 aaPredicted RBP29.47■■■□□ 2.31
PVT1-219ENST00000523427 BRPF3Q9ULD4 1205 aa29.47■■■□□ 2.31
PVT1-219ENST00000523427 FAM86B1E9PN63 330 aa29.46■■■□□ 2.31
PVT1-219ENST00000523427 ZBTB43O43298 467 aa29.46■■■□□ 2.31
PVT1-219ENST00000523427 FAM86B2P0C5J1 330 aa29.46■■■□□ 2.31
PVT1-219ENST00000523427 CBX2Q14781 532 aaPredicted RBP29.46■■■□□ 2.31
PVT1-219ENST00000523427 FAM228AQ86W67 206 aa29.46■■■□□ 2.31
PVT1-219ENST00000523427 ZDBF2Q9HCK1 2354 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 COL1A2P08123 1366 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 ATP4AP20648 1035 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 TECP42680 631 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 CRYBB1P53674 252 aaPredicted RBP29.45■■■□□ 2.31
PVT1-219ENST00000523427 AP3B2Q13367 1082 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 ENTPD7Q9NQZ7 604 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 BARHL2Q9NY43 387 aa29.45■■■□□ 2.31
PVT1-219ENST00000523427 GOLGA8AA7E2F4 631 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 GOLGA8BA8MQT2 603 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms