RNA–Protein interactions for RNA: ENST00000522250.5

FAM49B-220, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-220ENST00000522250 ZNF302Q9NR11 478 aa13.19□□□□□ -0.3
FAM49B-220ENST00000522250 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
FAM49B-220ENST00000522250 PLXNA4Q9HCM2 1894 aa13.19□□□□□ -0.3
FAM49B-220ENST00000522250 COL1A2P08123 1366 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
FAM49B-220ENST00000522250 MGEA5O60502 916 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 CSPG5O95196 566 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 MMP1P03956 469 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 DNAJB1P25685 340 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
FAM49B-220ENST00000522250 NTRK3Q16288 839 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
FAM49B-220ENST00000522250 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 MIS18BP1Q6P0N0 1132 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 GJD3Q8N144 294 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 REXO1Q8N1G1 1221 aaKnown RBP13.18□□□□□ -0.3
FAM49B-220ENST00000522250 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 LENG9Q96B70 501 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 ZNF577Q9BSK1 485 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
FAM49B-220ENST00000522250 CLDND1Q9NY35 253 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 PLAGL2Q9UPG8 496 aa13.18□□□□□ -0.3
FAM49B-220ENST00000522250 EDIL3O43854 480 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 C22orf31O95567 290 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 DLX2Q07687 328 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 TMEM31Q5JXX7 168 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 MAFBQ9Y5Q3 323 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 ITGB1P05556 798 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 CIITAP33076 1130 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 PRR16Q569H4 304 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 CCDC12Q8WUD4 166 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 P2RX5Q93086 422 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 PPP1R16BQ96T49 567 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 NCOA5Q9HCD5 579 aaKnown RBP13.17□□□□□ -0.3
FAM49B-220ENST00000522250 TBC1D22BQ9NU19 505 aa13.17□□□□□ -0.3
FAM49B-220ENST00000522250 LINC01565O15544 149 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 GPR37L1O60883 481 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 TBX10O75333 385 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 RPS6KA5O75582 802 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
FAM49B-220ENST00000522250 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
FAM49B-220ENST00000522250 SARSP49591 514 aaKnown RBP13.16□□□□□ -0.3
FAM49B-220ENST00000522250 ZP2Q05996 745 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 KIZQ2M2Z5 673 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 MCTP2Q6DN12 878 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
FAM49B-220ENST00000522250 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
FAM49B-220ENST00000522250 VPS54Q9P1Q0 977 aa13.16□□□□□ -0.3
FAM49B-220ENST00000522250 NCK2O43639 380 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 GPR32O75388 356 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 VTNP04004 478 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 PSAPP07602 524 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 IFNAR1P17181 557 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 GNA11P29992 359 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
FAM49B-220ENST00000522250 IRS1P35568 1242 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 PLA2G5P39877 138 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 EVCP57679 992 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 CLUL1Q15846 466 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 TRMT1LQ7Z2T5 733 aaKnown RBP13.15□□□□□ -0.3
FAM49B-220ENST00000522250 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
FAM49B-220ENST00000522250 OSMRQ99650 979 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 ADAM2Q99965 735 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 GABBR1Q9UBS5 961 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 ST3GAL5Q9UNP4 418 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 TRIOO75962 3097 aa13.15□□□□□ -0.3
FAM49B-220ENST00000522250 C9IYK1 514 aa13.14□□□□□ -0.31
FAM49B-220ENST00000522250 ZNF862O60290 1169 aa13.14□□□□□ -0.31
FAM49B-220ENST00000522250 CLCN3P51790 818 aa13.14□□□□□ -0.31
FAM49B-220ENST00000522250 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
FAM49B-220ENST00000522250 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms