RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 KRT32Q14532 448 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 JAKMIP3Q5VZ66 844 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 KIAA0319LQ8IZA0 1049 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 CRYGNQ8WXF5 182 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 PPP2R3CQ969Q6 453 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 ERVK-5Q9HDB9 667 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 ZNF302Q9NR11 478 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 LRFN2Q9ULH4 789 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 GINS2Q9Y248 185 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 COL1A2P08123 1366 aa23.1■■□□□ 1.29
SNHG6-205ENST00000521399 CYP3A4P08684 503 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 IRS1P35568 1242 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 GATMP50440 423 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 SMAD4Q13485 552 aaKnown RBP23.09■■□□□ 1.29
SNHG6-205ENST00000521399 PFKFB3Q16875 520 aaPredicted RBP23.09■■□□□ 1.29
SNHG6-205ENST00000521399 CSPP1Q1MSJ5 1256 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 MIS18BP1Q6P0N0 1132 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 SKAP1Q86WV1 359 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 UPF3BQ9BZI7 483 aaKnown RBP23.09■■□□□ 1.29
SNHG6-205ENST00000521399 CDHR5Q9HBB8 845 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 CD207Q9UJ71 328 aa23.09■■□□□ 1.29
SNHG6-205ENST00000521399 NOC2LQ9Y3T9 749 aaKnown RBP23.09■■□□□ 1.29
SNHG6-205ENST00000521399 FNDC1Q4ZHG4 1894 aaPredicted RBP23.09■■□□□ 1.29
SNHG6-205ENST00000521399 IGLV3-22A0A075B6J6 115 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 IPO5O00410 1097 aaKnown RBP23.08■■□□□ 1.29
SNHG6-205ENST00000521399 MGEA5O60502 916 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 RPS6KA5O75582 802 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 HMGB1P09429 215 aaKnown RBP23.08■■□□□ 1.29
SNHG6-205ENST00000521399 ADD1P35611 737 aaKnown RBP23.08■■□□□ 1.29
SNHG6-205ENST00000521399 ZNF484Q5JVG2 852 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 SWSAP1Q6NVH7 229 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 PDXDC2PQ6P474 469 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 ADGRD2Q7Z7M1 963 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 POF1BQ8WVV4 589 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 TMEM40Q8WWA1 233 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 UIMC1Q96RL1 719 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 POP1Q99575 1024 aaKnown RBP23.08■■□□□ 1.29
SNHG6-205ENST00000521399 PCDHB7Q9Y5E2 793 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 WDFY4Q6ZS81 3184 aa23.08■■□□□ 1.29
SNHG6-205ENST00000521399 PLXNA4Q9HCM2 1894 aa23.07■■□□□ 1.28
SNHG6-205ENST00000521399 ZBTB42B2RXF5 422 aa23.07■■□□□ 1.28
SNHG6-205ENST00000521399 ATP4AP20648 1035 aa23.07■■□□□ 1.28
SNHG6-205ENST00000521399 NDUFV1P49821 464 aa23.07■■□□□ 1.28
SNHG6-205ENST00000521399 ODR4Q5SWX8 454 aa23.07■■□□□ 1.28
SNHG6-205ENST00000521399 NAP1L2Q9ULW6 460 aaPredicted RBP23.07■■□□□ 1.28
SNHG6-205ENST00000521399 ST3GAL5Q9UNP4 418 aa23.07■■□□□ 1.28
SNHG6-205ENST00000521399 CCDC196A0A1B0GTZ2 297 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 ESYT2A0FGR8 921 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 IBSPP21815 317 aaPredicted RBP23.06■■□□□ 1.28
SNHG6-205ENST00000521399 METAP2P50579 478 aaKnown RBP eCLIP23.06■■□□□ 1.28
SNHG6-205ENST00000521399 SLC24A5Q71RS6 500 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 EFHBQ8N7U6 833 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 MSLNLQ96KJ4 702 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 ADAM2Q99965 735 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 ZNF577Q9BSK1 485 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 ZMYND12Q9H0C1 365 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 RGS18Q9NS28 235 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 C1orf112Q9NSG2 853 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 TBC1D22BQ9NU19 505 aa23.06■■□□□ 1.28
SNHG6-205ENST00000521399 RNF216Q9NWF9 866 aaPredicted RBP23.06■■□□□ 1.28
SNHG6-205ENST00000521399 MAFBQ9Y5Q3 323 aaPredicted RBP23.06■■□□□ 1.28
SNHG6-205ENST00000521399 DENND3A2RUS2 1198 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 ADAMTS3O15072 1205 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 GPR182O15218 404 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 C22orf31O95567 290 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 EYA4O95677 639 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 FGD1P98174 961 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 SETQ01105 290 aaPredicted RBP23.05■■□□□ 1.28
SNHG6-205ENST00000521399 MCTP2Q6DN12 878 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 ZNF746Q6NUN9 644 aaPredicted RBP23.05■■□□□ 1.28
SNHG6-205ENST00000521399 CKAP2LQ8IYA6 745 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 BBXQ8WY36 941 aaPredicted RBP23.05■■□□□ 1.28
SNHG6-205ENST00000521399 C6orf50Q9HD87 102 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 CLEC1BQ9P126 229 aa23.05■■□□□ 1.28
SNHG6-205ENST00000521399 C9IYK1 514 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 CDC45O75419 566 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 NRIP1P48552 1158 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 CRYBB1P53674 252 aaPredicted RBP23.04■■□□□ 1.28
SNHG6-205ENST00000521399 APOBRQ0VD83 1088 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 KIZQ2M2Z5 673 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 FAM102BQ5T8I3 360 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 REXO1Q8N1G1 1221 aaKnown RBP23.04■■□□□ 1.28
SNHG6-205ENST00000521399 CCDC12Q8WUD4 166 aaPredicted RBP23.04■■□□□ 1.28
SNHG6-205ENST00000521399 PCDHB12Q9Y5F1 795 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 WDR81Q562E7 1941 aa23.04■■□□□ 1.28
SNHG6-205ENST00000521399 ZNF318Q5VUA4 2279 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 TBKBP1A7MCY6 615 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 PPFIA3O75145 1194 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 CPA1P15085 419 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 UBE3AQ05086 875 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 PKN1Q16512 942 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 SPOUT1Q5T280 376 aaKnown RBP23.03■■□□□ 1.28
SNHG6-205ENST00000521399 Q6ZUG5 572 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 CENPQQ7L2Z9 268 aaPredicted RBP23.03■■□□□ 1.28
SNHG6-205ENST00000521399 RBM23Q86U06 439 aaKnown RBP23.03■■□□□ 1.28
SNHG6-205ENST00000521399 SMAP1Q8IYB5 467 aaPredicted RBP23.03■■□□□ 1.28
SNHG6-205ENST00000521399 PPP1R16BQ96T49 567 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 OSMRQ99650 979 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 AAASQ9NRG9 546 aa23.03■■□□□ 1.28
SNHG6-205ENST00000521399 PCDHGC5Q9Y5F6 944 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms