RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NPAS4Q8IUM7 802 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 NEK9Q8TD19 979 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 BBXQ8WY36 941 aaPredicted RBP14.11□□□□□ -0.15
CSMD1-205ENST00000519623 EPHX3Q9H6B9 360 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 CD320Q9NPF0 282 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 SH3GLB2Q9NR46 395 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 VPS54Q9P1Q0 977 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 NOC2LQ9Y3T9 749 aaKnown RBP14.11□□□□□ -0.15
CSMD1-205ENST00000519623 RWDD3Q9Y3V2 267 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 PCDHA10Q9Y5I2 948 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 ATG2AQ2TAZ0 1938 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 C22orf31O95567 290 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 PSAPP07602 524 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 COL9A1P20849 921 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 USP11P51784 963 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 CAMK1Q14012 370 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 FAM43BQ6ZT52 329 aaPredicted RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 SMAP1Q8IYB5 467 aaPredicted RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 CCDC148Q8NFR7 591 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 TMEM40Q8WWA1 233 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 KHSRPQ92945 711 aaKnown RBP eCLIP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 PABPC5Q96DU9 382 aaKnown RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 ZNF274Q96GC6 653 aaPredicted RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 C11orf84Q9BUA3 381 aaPredicted RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 PLVAPQ9BX97 442 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 LMAN2LQ9H0V9 348 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 NSUN3Q9H649 340 aaKnown RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 ERVK-5Q9HDB9 667 aa14.1□□□□□ -0.15
CSMD1-205ENST00000519623 MRPL42Q9Y6G3 142 aaKnown RBP14.1□□□□□ -0.15
CSMD1-205ENST00000519623 GRXCR2A6NFK2 248 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 MSH4O15457 936 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 MGEA5O60502 916 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 GPR32O75388 356 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 STAG3L1P0CL83 205 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 LTBRP36941 435 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
CSMD1-205ENST00000519623 FAM178BQ8IXR5 827 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 CKAP2LQ8IYA6 745 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 CMTR2Q8IYT2 770 aaKnown RBP14.09□□□□□ -0.15
CSMD1-205ENST00000519623 LARP6Q9BRS8 491 aaKnown RBP14.09□□□□□ -0.15
CSMD1-205ENST00000519623 TM6SF1Q9BZW5 370 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 GABBR1Q9UBS5 961 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 PLAGL2Q9UPG8 496 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 GINS2Q9Y248 185 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 CYP46A1Q9Y6A2 500 aa14.09□□□□□ -0.15
CSMD1-205ENST00000519623 H3BQ06 376 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 M0R2N6 131 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 ZNF862O60290 1169 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 IL9P15248 144 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 GATMP50440 423 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 CRYBB1P53674 252 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 NLRP5P59047 1200 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 SSRP1Q08945 709 aaKnown RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 KIZQ2M2Z5 673 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 CTC1Q2NKJ3 1217 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 PTCRAQ6ISU1 281 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 TRMT1LQ7Z2T5 733 aaKnown RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 LINC01465Q8N7H1 131 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 SPPL3Q8TCT6 385 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 SLC5A5Q92911 643 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 P2RX5Q93086 422 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 RIT2Q99578 217 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 C1QTNF1Q9BXJ1 281 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 ALG13Q9NP73 1137 aaKnown RBP14.08□□□□□ -0.16
CSMD1-205ENST00000519623 DISC1Q9NRI5 854 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 RGS18Q9NS28 235 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 RAPGEFL1Q9UHV5 662 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 ST3GAL5Q9UNP4 418 aa14.08□□□□□ -0.16
CSMD1-205ENST00000519623 CYP3A7-CYP3A51PA0A087WV96 503 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 WDR64B1ANS9 1081 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 C9IYK1 514 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 GPR182O15218 404 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 MAGEB2O15479 319 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 VTNP04004 478 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 CYP3A7P24462 503 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 DNAJB1P25685 340 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 FAM189BP81408 668 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 HYAL1Q12794 435 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 NPY5RQ15761 445 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 PUS10Q3MIT2 529 aaKnown RBP14.07□□□□□ -0.16
CSMD1-205ENST00000519623 PAN2Q504Q3 1202 aaKnown RBP14.07□□□□□ -0.16
CSMD1-205ENST00000519623 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 TRIM22Q8IYM9 498 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 GJA10Q969M2 543 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 ADAM2Q99965 735 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
CSMD1-205ENST00000519623 PCDHA4Q9UN74 947 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
CSMD1-205ENST00000519623 KIAA1671Q9BY89 1806 aa14.06□□□□□ -0.16
CSMD1-205ENST00000519623 FNDC1Q4ZHG4 1894 aaPredicted RBP14.06□□□□□ -0.16
CSMD1-205ENST00000519623 NCK2O43639 380 aa14.06□□□□□ -0.16
CSMD1-205ENST00000519623 PSMD10O75832 226 aa14.06□□□□□ -0.16
CSMD1-205ENST00000519623 DEXIO95424 95 aa14.06□□□□□ -0.16
CSMD1-205ENST00000519623 MMP1P03956 469 aa14.06□□□□□ -0.16
CSMD1-205ENST00000519623 ITGB1P05556 798 aa14.06□□□□□ -0.16
CSMD1-205ENST00000519623 DSC3Q14574 896 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms