RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 H0Y858 1186 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 DHX15O43143 795 aaKnown RBP12□□□□□ -0.49
PDGFRB-203ENST00000517660 CCNE2O96020 404 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 CHRNA1P02708 482 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 RPLP2P05387 115 aaKnown RBP12□□□□□ -0.49
PDGFRB-203ENST00000517660 ID4P47928 161 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 NLRP5P59047 1200 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 IGBP1P78318 339 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 SETQ01105 290 aaPredicted RBP12□□□□□ -0.49
PDGFRB-203ENST00000517660 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
PDGFRB-203ENST00000517660 PLCB4Q15147 1175 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 CLUL1Q15846 466 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM160B1Q5W0V3 765 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 ABHD15Q6UXT9 468 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 BANK1Q8NDB2 785 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 APBB2Q92870 758 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 ASIC4Q96FT7 647 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
PDGFRB-203ENST00000517660 ZNF577Q9BSK1 485 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 TLR9Q9NR96 1032 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 VPS54Q9P1Q0 977 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 TRPC6Q9Y210 931 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 DDX39AO00148 427 aaKnown RBP11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 BACH1O14867 736 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 DEXIO95424 95 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 USP11P51784 963 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 ZXDAP98168 799 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 MGAT3Q09327 533 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 PRR16Q569H4 304 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM117BQ6P1L5 589 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 SUGP1Q8IWZ8 645 aaKnown RBP11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 MYOCDQ8IZQ8 938 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM177A1Q8N128 213 aaPredicted RBP11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 RASGRP4Q8TDF6 673 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 DNAJB3Q8WWF6 145 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 IFIH1Q9BYX4 1025 aaKnown RBP11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 C22orf23Q9BZE7 217 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 OSBPL7Q9BZF2 842 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 CLDND1Q9NY35 253 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 INSL6Q9Y581 213 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 PCDHA2Q9Y5H9 948 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 CFAP47Q6ZTR5 3102 aa11.99□□□□□ -0.49
PDGFRB-203ENST00000517660 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 HBP1O60381 514 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 TBX10O75333 385 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 GHRP10912 638 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 AVPR2P30518 371 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 ANAPC15P60006 121 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 HTRA4P83105 476 aaPredicted RBP11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 STK3Q13188 491 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 LPIN1Q14693 890 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 EPC2Q52LR7 807 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 TIGD5Q53EQ6 642 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 IER5Q5VY09 327 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 ZNF746Q6NUN9 644 aaPredicted RBP11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 SWSAP1Q6NVH7 229 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 NME8Q8N427 588 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 ATP8B4Q8TF62 1192 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 TOP1MTQ969P6 601 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 ZNF302Q9NR11 478 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 TCEAL9Q9UHQ7 104 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 PCDHA4Q9UN74 947 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM50BQ9Y247 325 aa11.98□□□□□ -0.49
PDGFRB-203ENST00000517660 SMIM35A0A1B0GVV1 85 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 H3BNC9 293 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 CDKL5O76039 1030 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 KLRC1P26715 233 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 MRPS6P82932 125 aaKnown RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 KRT76Q01546 638 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 HYAL1Q12794 435 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 ZNF484Q5JVG2 852 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 FBXO47Q5MNV8 452 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 PDXDC2PQ6P474 469 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 MTHFD1LQ6UB35 978 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 SMAP1Q8IYB5 467 aaPredicted RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 ZBTB10Q96DT7 871 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 POP1Q99575 1024 aaKnown RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM49AQ9H0Q0 323 aaPredicted RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 NSUN3Q9H649 340 aaKnown RBP11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 PCDHA10Q9Y5I2 948 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 GTF3C3Q9Y5Q9 886 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 SQORQ9Y6N5 450 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 WDR87Q6ZQQ6 2873 aa11.97□□□□□ -0.49
PDGFRB-203ENST00000517660 EPG5Q9HCE0 2579 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 M0QZ92 97 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 ENPP3O14638 875 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 EDIL3O43854 480 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 PFKFB2O60825 505 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 PDGFBP01127 241 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms