RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 GNAT2P19087 354 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 EPHB2P29323 1055 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 MPGP29372 298 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 THBS3P49746 956 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 HTR6P50406 440 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 PTTG1IPP53801 180 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 KRTAP12-2P59991 146 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 MRPS35P82673 323 aaKnown RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 GRIN1Q05586 938 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC1A5Q15758 541 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 TBR1Q16650 682 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 DPY19L1Q2PZI1 675 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 LARP7Q4G0J3 582 aaKnown RBP eCLIP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 AMER1Q5JTC6 1135 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZNF772Q68DY9 489 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 HIST2H2BCQ6DN03 193 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 YTHDF3Q7Z739 585 aaKnown RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 MICAL1Q8TDZ2 1067 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 STK32AQ8WU08 396 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 SPRTNQ9H040 489 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 OR10A2Q9H208 303 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 NOL6Q9H6R4 1146 aaKnown RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 ANO2Q9NQ90 1003 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 NCDNQ9UBB6 729 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 CDC42EP3Q9UKI2 254 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 ICAM5Q9UMF0 924 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 ADAMTS5Q9UNA0 930 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 SQORQ9Y6N5 450 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM90A10PA6NDY2 464 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM86C2PA6NEL3 165 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM90A8PA6NJQ4 464 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ADAM10O14672 748 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 MAFKO60675 156 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 UBOX5O94941 541 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 LRG1P02750 347 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ENO2P09104 434 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM90A13PP0C7W8 464 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM90A24PP0C7X0 464 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 POLR2BP30876 1174 aaKnown RBP0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 MRE11P49959 708 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 JAM2P57087 298 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 SIM1P81133 766 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 NFYCQ13952 458 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 CCDC85BQ15834 202 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ASIC2Q16515 512 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 TSTD2Q5T7W7 516 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 MROH9Q5TGP6 573 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ABHD17BQ5VST6 288 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 STEAP3Q658P3 488 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 KRT40Q6A162 431 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC2A7Q6PXP3 512 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 LVRNQ6Q4G3 990 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM111BQ6SJ93 734 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 CEP68Q76N32 757 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 CUZD1Q86UP6 607 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 PPFIBP1Q86W92 1011 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 SYT12Q8IV01 421 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ARHGEF19Q8IW93 802 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 NANOGP1Q8N7R0 232 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 PRSS3P2Q8NHM4 247 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ACTRT2Q8TDY3 377 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 LINC00476Q8WZB0 136 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 MYEOVQ96EZ4 313 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 VPS16Q9H269 839 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM86C1Q9NVL1 165 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 FOXJ2Q9P0K8 574 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 KLF2Q9Y5W3 355 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 NOTCH4Q99466 2003 aa0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 ARHGEF17Q96PE2 2063 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.17-201ENST00000517256 TCF20Q9UGU0 1960 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 PIPSLA2A3N6 862 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 C7orf72A4D263 438 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 KCNU1A8MYU2 1149 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 GTPBP1O00178 669 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SOCS2O14508 198 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 PPP1R11O60927 126 aaPredicted RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 NCR1O76036 304 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 OAZ2O95190 189 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 HTR3BO95264 441 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 FPR2P25090 351 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 ITPKBP27987 946 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 STAT3P40763 770 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 ETV4P43268 484 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 RARRES1P49788 294 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 PROK1P58294 105 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 LINC00205P59089 165 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 PFKPQ01813 784 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SF3B2Q13435 895 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 TOP3AQ13472 1001 aaPredicted RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 RAB33AQ14088 237 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 MCM6Q14566 821 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZNF169Q14929 603 aaPredicted RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 TMEM201Q5SNT2 666 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 CEP85LQ5SZL2 805 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 LCE3CQ5T5A8 94 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 MFSD5Q6N075 450 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SV2BQ7L1I2 683 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 AMIGO2Q86SJ2 522 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 CPEB3Q8NE35 698 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 REPS2Q8NFH8 660 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms