RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 BBXQ8WY36 941 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 P2RX5Q93086 422 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 EPHX3Q9H6B9 360 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 GINS2Q9Y248 185 aa16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 MRPL42Q9Y6G3 142 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-229ENST00000512418 ZBTB42B2RXF5 422 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 H3BQ06 376 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 MMP1P03956 469 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 PSAPP07602 524 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 ATP4AP20648 1035 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 EVCP57679 992 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 NAALADL2Q58DX5 795 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 ODR4Q5SWX8 454 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 EP400NLQ6ZTU2 488 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 RASGRP4Q8TDF6 673 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 UIMC1Q96RL1 719 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 SLC26A6Q9BXS9 759 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 ERVK-5Q9HDB9 667 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 CD320Q9NPF0 282 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 PCDHA10Q9Y5I2 948 aa16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 MAFBQ9Y5Q3 323 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-229ENST00000512418 MYO7AQ13402 2215 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 MYH9P35579 1960 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 EPB41L2O43491 1005 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 RPS6KA5O75582 802 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 C22orf31O95567 290 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 PDIA3P30101 505 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 SARSP49591 514 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 GJD3Q8N144 294 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 KHSRPQ92945 711 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 LENG9Q96B70 501 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 CLDND1Q9NY35 253 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 VPS54Q9P1Q0 977 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 PLAGL2Q9UPG8 496 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 FAM50BQ9Y247 325 aa16.66■□□□□ 0.26
CCHCR1-229ENST00000512418 GPR182O15218 404 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 CCT2P78371 535 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 HYAL1Q12794 435 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 CTC1Q2NKJ3 1217 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 PAN2Q504Q3 1202 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 RUFY3Q7L099 469 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 TMEM40Q8WWA1 233 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 FAM167AQ96KS9 214 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 ALG13Q9NP73 1137 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 SH3GLB2Q9NR46 395 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 C1orf112Q9NSG2 853 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 GABBR1Q9UBS5 961 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 RAPGEFL1Q9UHV5 662 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 NOC2LQ9Y3T9 749 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 EVPLQ92817 2033 aa16.65■□□□□ 0.26
CCHCR1-229ENST00000512418 DENND3A2RUS2 1198 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 WDR64B1ANS9 1081 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 MGEA5O60502 916 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 SSTR3P32745 418 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 KIZQ2M2Z5 673 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 SLC24A5Q71RS6 500 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 METTL13Q8N6R0 699 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 PPP2R3CQ969Q6 453 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 OSMRQ99650 979 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 ADAM2Q99965 735 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 CDHR5Q9HBB8 845 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 RGS18Q9NS28 235 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 ST3GAL5Q9UNP4 418 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
CCHCR1-229ENST00000512418 PI4K2BG5E9Z4 385 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 MAGEB2O15479 319 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 CSPG5O95196 566 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 ITGB1P05556 798 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 LTBRP36941 435 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 USP11P51784 963 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 NLRP5P59047 1200 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 CAMK1Q14012 370 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 TOB2Q14106 344 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 TRMT1LQ7Z2T5 733 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 KLHL23Q8NBE8 558 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 RIT2Q99578 217 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 PRKAG3Q9UGI9 489 aa16.63■□□□□ 0.25
CCHCR1-229ENST00000512418 C9IYK1 514 aa16.62■□□□□ 0.25
CCHCR1-229ENST00000512418 MSH4O15457 936 aa16.62■□□□□ 0.25
CCHCR1-229ENST00000512418 GAS7O60861 476 aa16.62■□□□□ 0.25
CCHCR1-229ENST00000512418 GPR37L1O60883 481 aa16.62■□□□□ 0.25
CCHCR1-229ENST00000512418 GPR32O75388 356 aa16.62■□□□□ 0.25
CCHCR1-229ENST00000512418 VTNP04004 478 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms