RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 FUKQ8N0W3 1084 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 EDAQ92838 391 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 KIAA1683Q9H0B3 1180 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 VPS11Q9H270 941 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 RASSF10A6NK89 507 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 SCDO00767 359 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 FSHBP01225 129 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 APPP05067 770 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 COMTP21964 271 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 KCNQ1P51787 676 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 PRKD1Q15139 912 aaPredicted RBP7.78□□□□□ -1.16
NUP54-209ENST00000510569 TBR1Q16650 682 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 C2orf27AQ580R0 203 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 CFHR4Q92496 578 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 DPYSL5Q9BPU6 564 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 SCAND2PQ9GZW5 306 aaPredicted RBP7.78□□□□□ -1.16
NUP54-209ENST00000510569 TRIM39Q9HCM9 518 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 UCKL1Q9NWZ5 548 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 NR2E1Q9Y466 385 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
NUP54-209ENST00000510569 A0A0G2JNJ9 132 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 FOXP2O15409 715 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 KCNA6P17658 529 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 ACVRL1P37023 503 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 CD83Q01151 205 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 SORCS2Q96PQ0 1159 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 ADOQ96SZ5 270 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 Q9UFV3 132 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 PTCH2Q9Y6C5 1203 aa7.77□□□□□ -1.17
NUP54-209ENST00000510569 SLC12A8A0AV02 714 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 GDF5P43026 501 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 SF3A1Q15459 793 aaKnown RBP7.76□□□□□ -1.17
NUP54-209ENST00000510569 ABHD17CQ6PCB6 329 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 OTOP1Q7RTM1 612 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 OTOP2Q7RTS6 562 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 POLNQ7Z5Q5 900 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 FGD2Q7Z6J4 655 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 GBP4Q96PP9 640 aa7.76□□□□□ -1.17
NUP54-209ENST00000510569 CDC14BO60729 498 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 FZD7O75084 574 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 MOGSQ13724 837 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 NOLC1Q14978 699 aaKnown RBP eCLIP7.75□□□□□ -1.17
NUP54-209ENST00000510569 PCOLCEQ15113 449 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 TMEM177Q53S58 311 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 CATSPEREQ5SY80 951 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 RNF207Q6ZRF8 634 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 Q6ZSN1 163 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 USP30Q70CQ3 517 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 PLA2G12BQ9BX93 195 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 OR10A2Q9H208 303 aa7.75□□□□□ -1.17
NUP54-209ENST00000510569 NCOA5Q9HCD5 579 aaKnown RBP7.75□□□□□ -1.17
NUP54-209ENST00000510569 PRAMEF22A3QJZ6 481 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 CYR61O00622 381 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 AMHP03971 560 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 RPS19P39019 145 aaKnown RBP7.74□□□□□ -1.17
NUP54-209ENST00000510569 GRAMD4Q6IC98 578 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 FILIP1Q7Z7B0 1213 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 IGSF22Q8N9C0 903 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 WDR48Q8TAF3 677 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 PUF60Q9UHX1 559 aaKnown RBP7.74□□□□□ -1.17
NUP54-209ENST00000510569 CDC42EP3Q9UKI2 254 aa7.74□□□□□ -1.17
NUP54-209ENST00000510569 GOLGA6L22H0YM25 854 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 HIP1RO75146 1068 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 ZBTB48P10074 688 aaPredicted RBP7.73□□□□□ -1.17
NUP54-209ENST00000510569 MRE11P49959 708 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 MECP2P51608 486 aaKnown RBP7.73□□□□□ -1.17
NUP54-209ENST00000510569 IRF9Q00978 393 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 HGFACQ04756 655 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 MAMDC4Q6UXC1 1216 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 LILRB2Q8N423 598 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 HIPK4Q8NE63 616 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 OR14A2Q96R54 314 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 BOCQ9BWV1 1114 aa7.73□□□□□ -1.17
NUP54-209ENST00000510569 PMS2P1A4D2B8 440 aa7.72□□□□□ -1.17
NUP54-209ENST00000510569 PLD2O14939 933 aa7.72□□□□□ -1.17
NUP54-209ENST00000510569 SLPIP03973 132 aa7.72□□□□□ -1.17
NUP54-209ENST00000510569 ACO1P21399 889 aaKnown RBP7.72□□□□□ -1.17
NUP54-209ENST00000510569 MEOX1P50221 254 aa7.72□□□□□ -1.17
NUP54-209ENST00000510569 MIIPQ5JXC2 388 aa7.72□□□□□ -1.17
NUP54-209ENST00000510569 RTN4RL1Q86UN2 441 aaPredicted RBP7.72□□□□□ -1.17
NUP54-209ENST00000510569 CALML6Q8TD86 181 aa7.72□□□□□ -1.17
NUP54-209ENST00000510569 FOXRED1Q96CU9 486 aaPredicted RBP7.72□□□□□ -1.17
NUP54-209ENST00000510569 APEX1P27695 318 aaKnown RBP7.71□□□□□ -1.18
NUP54-209ENST00000510569 ALDH6A1Q02252 535 aaKnown RBP7.71□□□□□ -1.18
NUP54-209ENST00000510569 TMEM132BQ14DG7 1078 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 CC2D1AQ6P1N0 951 aaPredicted RBP7.71□□□□□ -1.18
NUP54-209ENST00000510569 USP51Q70EK9 711 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 RTKN2Q8IZC4 609 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 BCL6BQ8N143 479 aaPredicted RBP7.71□□□□□ -1.18
NUP54-209ENST00000510569 C2orf69Q8N8R5 385 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 PMFBP1Q8TBY8 1022 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 FOXB1Q99853 325 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 OSBPL2Q9H1P3 480 aa7.71□□□□□ -1.18
NUP54-209ENST00000510569 C12orf65Q9H3J6 166 aaKnown RBP7.71□□□□□ -1.18
NUP54-209ENST00000510569 FNTBP49356 437 aa7.7□□□□□ -1.18
NUP54-209ENST00000510569 FOXE3Q13461 319 aa7.7□□□□□ -1.18
NUP54-209ENST00000510569 ZNF503Q96F45 646 aa7.7□□□□□ -1.18
NUP54-209ENST00000510569 FAM89AQ96GI7 184 aa7.7□□□□□ -1.18
NUP54-209ENST00000510569 VWA7Q9Y334 891 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms