RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KRT76Q01546 638 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 SMAP1Q8IYB5 467 aaPredicted RBP14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 KIAA0319LQ8IZA0 1049 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 NME8Q8N427 588 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 BANK1Q8NDB2 785 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 TMEM40Q8WWA1 233 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 TMX1Q9H3N1 280 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 SH3GLB2Q9NR46 395 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 MAFBQ9Y5Q3 323 aaPredicted RBP14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 KCNA5P22460 613 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 BMPR1AP36894 532 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 BTG3Q14201 252 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 COL19A1Q14993 1142 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 TMEM266Q2M3C6 531 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 LEXMQ3ZCV2 418 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 TCEAL5Q5H9L2 206 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF484Q5JVG2 852 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 NPAS4Q8IUM7 802 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 BBXQ8WY36 941 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 C11orf84Q9BUA3 381 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 UPF3BQ9BZI7 483 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 NSUN3Q9H649 340 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 CDHR5Q9HBB8 845 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 GINS2Q9Y248 185 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 RWDD3Q9Y3V2 267 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 CYP46A1Q9Y6A2 500 aa14.74□□□□□ -0.05
HMGCS1-205ENST00000508319 GRM6O15303 877 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 MGEA5O60502 916 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 RB1P06400 928 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 PSAPP07602 524 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 NPY5RQ15761 445 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 CKAP2LQ8IYA6 745 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 TRIM22Q8IYM9 498 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 CMTR2Q8IYT2 770 aaKnown RBP14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 TM6SF1Q9BZW5 370 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 ERVK-5Q9HDB9 667 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 GABBR1Q9UBS5 961 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 NOC2LQ9Y3T9 749 aaKnown RBP14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 PCDHA10Q9Y5I2 948 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 MRPL42Q9Y6G3 142 aaKnown RBP14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 C5orf42Q9H799 3197 aa14.73□□□□□ -0.05
HMGCS1-205ENST00000508319 WDR64B1ANS9 1081 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 M0R2N6 131 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 MSH4O15457 936 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 USP11P51784 963 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 NLRP5P59047 1200 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 SSRP1Q08945 709 aaKnown RBP14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 KIZQ2M2Z5 673 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 NEK9Q8TD19 979 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 TBCKQ8TEA7 893 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 LARP6Q9BRS8 491 aaKnown RBP14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 PLVAPQ9BX97 442 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 LMAN2LQ9H0V9 348 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 TCEAL9Q9UHQ7 104 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 PLXNA4Q9HCM2 1894 aa14.72□□□□□ -0.05
HMGCS1-205ENST00000508319 CPLX1O14810 134 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF862O60290 1169 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 GPR32O75388 356 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 RPS6KA5O75582 802 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 DEXIO95424 95 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 MMP1P03956 469 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 SARSP49591 514 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 GATMP50440 423 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 CLCN3P51790 818 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 NFX1Q12986 1120 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 UGCGQ16739 394 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 PAN2Q504Q3 1202 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 TRMT1LQ7Z2T5 733 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 LINC01465Q8N7H1 131 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 SLC5A5Q92911 643 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 GJA10Q969M2 543 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 PABPC5Q96DU9 382 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 FAM167AQ96KS9 214 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 AIFM3Q96NN9 605 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 PPP1R16BQ96T49 567 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 RIT2Q99578 217 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 OSMRQ99650 979 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 DISC1Q9NRI5 854 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 PCDHA4Q9UN74 947 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 SAMM50Q9Y512 469 aa14.71□□□□□ -0.05
HMGCS1-205ENST00000508319 H3BQ06 376 aaPredicted RBP14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 CHMP2AO43633 222 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 GAS7O60861 476 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 VTNP04004 478 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 OATP04181 439 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 STAG3L1P0CL83 205 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 IL9P15248 144 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 PRKCEQ02156 737 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 STK3Q13188 491 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 CAMK1Q14012 370 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 PTCRAQ6ISU1 281 aaPredicted RBP14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 FAM43BQ6ZT52 329 aaPredicted RBP14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 FAM228AQ86W67 206 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 METTL13Q8N6R0 699 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 DAGLBQ8NCG7 672 aa14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.06
HMGCS1-205ENST00000508319 P2RX5Q93086 422 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms