RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 NAGPAQ9UK23 515 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 FAM170AA1A519 330 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 ENTPD3O75355 529 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 CARSP49589 748 aaKnown RBP11.96□□□□□ -0.5
LIN54-207ENST00000508171 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 LRCH2Q5VUJ6 765 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 C1orf186Q6ZWK4 172 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 EPB41L5Q9HCM4 733 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 WRAP73Q9P2S5 460 aaPredicted RBP11.96□□□□□ -0.5
LIN54-207ENST00000508171 LCMT1Q9UIC8 334 aa11.96□□□□□ -0.5
LIN54-207ENST00000508171 MYH11P35749 1972 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 PSMD10O75832 226 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 FAM153BP0C7A2 387 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
LIN54-207ENST00000508171 RPL13P26373 211 aaKnown RBP11.95□□□□□ -0.5
LIN54-207ENST00000508171 NOP2P46087 812 aaKnown RBP11.95□□□□□ -0.5
LIN54-207ENST00000508171 EPHB4P54760 987 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 ZYXQ15942 572 aaKnown RBP11.95□□□□□ -0.5
LIN54-207ENST00000508171 FAM153CQ494X1 144 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 CC2D2BQ6DHV5 1058 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 ALKBH5Q6P6C2 394 aaKnown RBP11.95□□□□□ -0.5
LIN54-207ENST00000508171 GBP6Q6ZN66 633 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 GOLGA6L1Q8N7Z2 621 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 IFT81Q8WYA0 676 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 BORCS6Q96GS4 357 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
LIN54-207ENST00000508171 KRT12Q99456 494 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 GCNT4Q9P109 453 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 FAM153AQ9UHL3 310 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 NFU1Q9UMS0 254 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 ZMYM2Q9UBW7 1377 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 UTRNP46939 3433 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 GUCY2DQ02846 1103 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 OLFML3Q9NRN5 406 aa11.95□□□□□ -0.5
LIN54-207ENST00000508171 KCNK3O14649 394 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 FAM13AO94988 1023 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 HEXIM1O94992 359 aaKnown RBP11.94□□□□□ -0.5
LIN54-207ENST00000508171 SKIDA1Q1XH10 827 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 PROCA1Q8NCQ7 364 aaPredicted RBP11.94□□□□□ -0.5
LIN54-207ENST00000508171 C7orf43Q8WVR3 580 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 METTL14Q9HCE5 456 aaKnown RBP11.94□□□□□ -0.5
LIN54-207ENST00000508171 RNF14Q9UBS8 474 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 SRCAPQ6ZRS2 3230 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GOLGA6CA6NDK9 693 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 TULP2O00295 520 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 PLSCR1O15162 318 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GFPT2O94808 682 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GOLGA6DP0CG33 693 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 ARP10275 920 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 JAM2P57087 298 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GLE1Q53GS7 698 aaKnown RBP11.94□□□□□ -0.5
LIN54-207ENST00000508171 STYK1Q6J9G0 422 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 RUBCNQ92622 972 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 FIZ1Q96SL8 496 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GDF3Q9NR23 364 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GOLGA6AQ9NYA3 693 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 BZW2Q9Y6E2 419 aaKnown RBP11.94□□□□□ -0.5
LIN54-207ENST00000508171 PRKCIP41743 596 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 RPS6KA1Q15418 735 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 EMBQ6PCB8 327 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 KLHL7Q8IXQ5 586 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 IFT20Q8IY31 132 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 USP38Q8NB14 1042 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 ARL8AQ96BM9 186 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 TUFT1Q9NNX1 390 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 TMX2Q9Y320 296 aa11.94□□□□□ -0.5
LIN54-207ENST00000508171 GCOM1H8Y6P7 765 aaPredicted RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 DDX3XO00571 662 aaKnown RBP eCLIP11.93□□□□□ -0.51e-9■■■□□ 18.6
LIN54-207ENST00000508171 SLC16A3O15427 465 aaKnown RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 GAS7O60861 476 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 RPS6KA5O75582 802 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 POLR2MP0CAP2 368 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 GAP43P17677 238 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 PPP2R5CQ13362 524 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 C10orf76Q5T2E6 689 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 MIGA2Q7L4E1 593 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 ZNF720Q7Z2F6 126 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 FAM186BQ8IYM0 893 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 LRRC57Q8N9N7 239 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 PARVGQ9HBI0 331 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 SHTN1A0MZ66 631 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 BTNL10A8MVZ5 291 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 RAD51CO43502 376 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 C21orf2O43822 256 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 KIF4AO95239 1232 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 TNFRSF8P28908 595 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 CYP2J2P51589 502 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 GUCY2FP51841 1108 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 CEP55Q53EZ4 464 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 RDH13Q8NBN7 331 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 FAM76AQ8TAV0 307 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms