RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 MAFBQ9Y5Q3 323 aaPredicted RBP17.98■□□□□ 0.47
SSBP2-207ENST00000507472 COL1A2P08123 1366 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 EDIL3O43854 480 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 PTCRAQ6ISU1 281 aaPredicted RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 EP400NLQ6ZTU2 488 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 RUFY3Q7L099 469 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 SMAP1Q8IYB5 467 aaPredicted RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 NEK9Q8TD19 979 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 TMEM40Q8WWA1 233 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 KHSRPQ92945 711 aaKnown RBP eCLIP17.97■□□□□ 0.476e-7■■■□□ 15.9
SSBP2-207ENST00000507472 LENG9Q96B70 501 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 PABPC5Q96DU9 382 aaKnown RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 RAPGEFL1Q9UHV5 662 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 NOC2LQ9Y3T9 749 aaKnown RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 SAMM50Q9Y512 469 aa17.97■□□□□ 0.47
SSBP2-207ENST00000507472 MRPL42Q9Y6G3 142 aaKnown RBP17.97■□□□□ 0.47
SSBP2-207ENST00000507472 GRXCR2A6NFK2 248 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 RPS6KA5O75582 802 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 C22orf31O95567 290 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 PSAPP07602 524 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 STAG3L1P0CL83 205 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 IL9P15248 144 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 COL19A1Q14993 1142 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 FAM178BQ8IXR5 827 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 CMTR2Q8IYT2 770 aaKnown RBP17.96■□□□□ 0.47
SSBP2-207ENST00000507472 METTL13Q8N6R0 699 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 CCDC148Q8NFR7 591 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
SSBP2-207ENST00000507472 PLVAPQ9BX97 442 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 LMAN2LQ9H0V9 348 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 ERVK-5Q9HDB9 667 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 ALG13Q9NP73 1137 aaKnown RBP17.96■□□□□ 0.47
SSBP2-207ENST00000507472 GABBR1Q9UBS5 961 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 ST3GAL5Q9UNP4 418 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 PLAGL2Q9UPG8 496 aa17.96■□□□□ 0.47
SSBP2-207ENST00000507472 MGEA5O60502 916 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
SSBP2-207ENST00000507472 GATMP50440 423 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 NLRP5P59047 1200 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 KIZQ2M2Z5 673 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 PAN2Q504Q3 1202 aaKnown RBP17.95■□□□□ 0.46
SSBP2-207ENST00000507472 PPP1R16BQ96T49 567 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 SH3GLB2Q9NR46 395 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 TCEAL9Q9UHQ7 104 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 LRFN2Q9ULH4 789 aa17.95■□□□□ 0.46
SSBP2-207ENST00000507472 MSH4O15457 936 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 EPB41L2O43491 1005 aaKnown RBP17.94■□□□□ 0.46
SSBP2-207ENST00000507472 CSPG5O95196 566 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 VTNP04004 478 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
SSBP2-207ENST00000507472 USP11P51784 963 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 CRYBB1P53674 252 aaPredicted RBP17.94■□□□□ 0.46
SSBP2-207ENST00000507472 CAMK1Q14012 370 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 PUS10Q3MIT2 529 aaKnown RBP17.94■□□□□ 0.46
SSBP2-207ENST00000507472 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 ADAM2Q99965 735 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 CLDND1Q9NY35 253 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 PCDHB7Q9Y5E2 793 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 CYP46A1Q9Y6A2 500 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 EVPLQ92817 2033 aa17.94■□□□□ 0.46
SSBP2-207ENST00000507472 NLRC5Q86WI3 1866 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 DENND3A2RUS2 1198 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 WDR64B1ANS9 1081 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 GPR182O15218 404 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 NCK2O43639 380 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 GPR32O75388 356 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 DNAJB1P25685 340 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 LTBRP36941 435 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 SSRP1Q08945 709 aaKnown RBP17.93■□□□□ 0.46
SSBP2-207ENST00000507472 HYAL1Q12794 435 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 CTC1Q2NKJ3 1217 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 FAM43BQ6ZT52 329 aaPredicted RBP17.93■□□□□ 0.46
SSBP2-207ENST00000507472 GJD3Q8N144 294 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 KLHL23Q8NBE8 558 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 P2RX5Q93086 422 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 GJA10Q969M2 543 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 OSMRQ99650 979 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
SSBP2-207ENST00000507472 DISC1Q9NRI5 854 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 RGS18Q9NS28 235 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 CEP131Q9UPN4 1083 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 LOXHD1Q8IVV2 1947 aa17.93■□□□□ 0.46
SSBP2-207ENST00000507472 CPLX1O14810 134 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 MAGEB2O15479 319 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 ZNF862O60290 1169 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 GAS7O60861 476 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 MMP1P03956 469 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 ITGB1P05556 798 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 CLCN3P51790 818 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 ODR4Q5SWX8 454 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 EFCAB12Q6NXP0 572 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 SLC24A5Q71RS6 500 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 TBCKQ8TEA7 893 aa17.92■□□□□ 0.46
SSBP2-207ENST00000507472 ZNF274Q96GC6 653 aaPredicted RBP17.92■□□□□ 0.46
SSBP2-207ENST00000507472 RIT2Q99578 217 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms