RNA–Protein interactions for RNA: ENST00000506407.1

AC055733.1-201, humanhuman

BASIC

Gene AC055733.1, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.1-201ENST00000506407 VTNP04004 478 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 CLCN3P51790 818 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 RBM10P98175 930 aaKnown RBP12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 NTRK3Q16288 839 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 UGCGQ16739 394 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 MIS18BP1Q6P0N0 1132 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 CKAP2LQ8IYA6 745 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 LENG9Q96B70 501 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 ZMYND12Q9H0C1 365 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 GABBR1Q9UBS5 961 aa12.09□□□□□ -0.47
AC055733.1-201ENST00000506407 ESYT2A0FGR8 921 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 PI4K2BG5E9Z4 385 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 CHMP2AO43633 222 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 HBP1O60381 514 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 MMP1P03956 469 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 RB1P06400 928 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 CYP3A4P08684 503 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 FGFR1P11362 822 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 ZP2Q05996 745 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 RBM23Q86U06 439 aaKnown RBP12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 FAM228AQ86W67 206 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 CMTR2Q8IYT2 770 aaKnown RBP12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 SPPL3Q8TCT6 385 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 ADAM2Q99965 735 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 FTHL17Q9BXU8 183 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 C6orf50Q9HD87 102 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 ST3GAL5Q9UNP4 418 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 KDM3AQ9Y4C1 1321 aa12.08□□□□□ -0.48
AC055733.1-201ENST00000506407 NID2Q14112 1375 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 TBKBP1A7MCY6 615 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 ZNF862O60290 1169 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 PLA2G5P39877 138 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 SARSP49591 514 aaKnown RBP12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 SLC26A2P50443 739 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 RCAN1P53805 252 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 LRFN2Q9ULH4 789 aa12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 MAFBQ9Y5Q3 323 aaPredicted RBP12.07□□□□□ -0.48
AC055733.1-201ENST00000506407 CCDC196A0A1B0GTZ2 297 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 DENND3A2RUS2 1198 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 PER2O15055 1255 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 MSH4O15457 936 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 GPR32O75388 356 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 FGFR4P22455 802 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 PDIA3P30101 505 aaKnown RBP12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 PBX3P40426 434 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 NRIP1P48552 1158 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 TOB2Q14106 344 aaPredicted RBP12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 ZNF484Q5JVG2 852 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 ZNF746Q6NUN9 644 aaPredicted RBP12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 NME8Q8N427 588 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 VN1R2Q8NFZ6 395 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 FAM122AQ96E09 287 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 AGXT2Q9BYV1 514 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 CLEC1BQ9P126 229 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 SAMM50Q9Y512 469 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 SQORQ9Y6N5 450 aa12.06□□□□□ -0.48
AC055733.1-201ENST00000506407 COL1A2P08123 1366 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 C9IYK1 514 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 MBTPS2O43462 519 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 GPR37L1O60883 481 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 CSDE1O75534 798 aaKnown RBP12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 TDP2O95551 362 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 GLP2RO95838 553 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 PSAPP07602 524 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 CIITAP33076 1130 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 NDUFV1P49821 464 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 SETQ01105 290 aaPredicted RBP12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 PRKCEQ02156 737 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 STK3Q13188 491 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 ADAM15Q13444 863 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 DRP2Q13474 957 aa12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
AC055733.1-201ENST00000506407 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms