RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ERVK-21P61565 698 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 INF2Q27J81 1249 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 MIS18BP1Q6P0N0 1132 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 MBOAT7Q96N66 472 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 SLKQ9H2G2 1235 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 GABBR1Q9UBS5 961 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 TRPV2Q9Y5S1 764 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 STK36Q9NRP7 1315 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 SMIM35A0A1B0GVV1 85 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 TMEM150BA6NC51 233 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 ENPP3O14638 875 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 CHMP2AO43633 222 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 HBP1O60381 514 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 PSMD10O75832 226 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 C22orf31O95567 290 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 TMEM266Q2M3C6 531 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 MCTP2Q6DN12 878 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 B3GNT9Q6UX72 402 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 KIAA0319LQ8IZA0 1049 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 TMX1Q9H3N1 280 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 RC3H2Q9HBD1 1191 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 TBC1D22BQ9NU19 505 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 XIRP2A4UGR9 3374 aa18.95■□□□□ 0.62
PDLIM7-215ENST00000506161 PLXNA4Q9HCM2 1894 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 JAK2O60674 1132 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 USP11P51784 963 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 FAM160B1Q5W0V3 765 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 TSHZ1Q6ZSZ6 1077 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 CRIPAKQ8N1N5 446 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 ETNPPLQ8TBG4 499 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 APBB2Q92870 758 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 TGS1Q96RS0 853 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 PCDHA10Q9Y5I2 948 aa18.94■□□□□ 0.62
PDLIM7-215ENST00000506161 COL1A2P08123 1366 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 CYP3A7-CYP3A51PA0A087WV96 503 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 WNT7AO00755 349 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 MGEA5O60502 916 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 STBD1O95210 358 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 CYP3A7P24462 503 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 SLC26A2P50443 739 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 FOSBP53539 338 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 KRT76Q01546 638 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 C8orf34Q49A92 452 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 Q4G0T1 1027 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 LINC01465Q8N7H1 131 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 KIF2CQ99661 725 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 CELF4Q9BZC1 486 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 PADI3Q9ULW8 664 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 NOC2LQ9Y3T9 749 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 INSL6Q9Y581 213 aa18.93■□□□□ 0.62
PDLIM7-215ENST00000506161 MYO7AQ13402 2215 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 GTPBP6O43824 516 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 GPR37L1O60883 481 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 PSAPP07602 524 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 GATMP50440 423 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 CLCN3P51790 818 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 NR5A1Q13285 461 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 LRCH2Q5VUJ6 765 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 RSPH3Q86UC2 560 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 SMAP1Q8IYB5 467 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 NSUN7Q8NE18 718 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 TNFRSF25Q93038 417 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 GTF3C6Q969F1 213 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 ZNF668Q96K58 619 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 SH2D3AQ9BRG2 576 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 DISC1Q9NRI5 854 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 COG5Q9UP83 839 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
PDLIM7-215ENST00000506161 BRWD1Q9NSI6 2320 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 EML1O00423 815 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 GAS7O60861 476 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 VTNP04004 478 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 NEK4P51957 841 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 NONOQ15233 471 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 ALYREFQ86V81 257 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 CKAP2LQ8IYA6 745 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 CEP89Q96ST8 783 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 YME1L1Q96TA2 773 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 RIT2Q99578 217 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 TEKT3Q9BXF9 490 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 ERVK-5Q9HDB9 667 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
PDLIM7-215ENST00000506161 WDR64B1ANS9 1081 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 GPR32O75388 356 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 PRKCEQ02156 737 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 DRP2Q13474 957 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 KIZQ2M2Z5 673 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 IER5Q5VY09 327 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 CPLX2Q6PUV4 134 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 ZNF689Q96CS4 500 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 C11orf16Q9NQ32 467 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
PDLIM7-215ENST00000506161 OATP04181 439 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms