RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ZSWIM2Q8NEG5 633 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 EXTL1Q92935 676 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 ING1Q9UK53 422 aaPredicted RBP6.04□□□□□ -1.44
SUB1-204ENST00000504016 FBXO10Q9UK96 956 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 CBLCQ9ULV8 474 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 PCDHA9Q9Y5H5 950 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 ARVCFO00192 962 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 KCNK3O14649 394 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 ARHGAP6O43182 974 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 RAPGEF3O95398 923 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 C6orf222P0C671 652 aaPredicted RBP6.03□□□□□ -1.44
SUB1-204ENST00000504016 AOAHP28039 575 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 DNM2P50570 870 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 FAM47CQ5HY64 1035 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 ZNF503Q96F45 646 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 FAM89AQ96GI7 184 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 PLA2G12BQ9BX93 195 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 PUF60Q9UHX1 559 aaKnown RBP6.03□□□□□ -1.44
SUB1-204ENST00000504016 CDC42EP3Q9UKI2 254 aa6.03□□□□□ -1.44
SUB1-204ENST00000504016 CCDC66A2RUB6 948 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 ASMTLO95671 621 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 C4BPAP04003 597 aaKnown RBP6.02□□□□□ -1.45
SUB1-204ENST00000504016 MC4RP32245 332 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 TGFB2P61812 414 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 HERVK_113P62684 666 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 GABREP78334 506 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 FHL2Q14192 279 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 TBR1Q16650 682 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 LONRF2Q1L5Z9 754 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 GIMAP6Q6P9H5 292 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 Q6ZSN1 163 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 OTOP2Q7RTS6 562 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 ZC3H7AQ8IWR0 971 aaKnown RBP6.02□□□□□ -1.45
SUB1-204ENST00000504016 SLC7A14Q8TBB6 771 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 WNK4Q96J92 1243 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 KIAA1683Q9H0B3 1180 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 SLC52A2Q9HAB3 445 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 FANCLQ9NW38 375 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 SLC30A1Q9Y6M5 507 aa6.02□□□□□ -1.45
SUB1-204ENST00000504016 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 MATN2O00339 956 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 CLASP2O75122 1294 aaKnown RBP6.01□□□□□ -1.45
SUB1-204ENST00000504016 CRTAMO95727 393 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 APPP05067 770 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 RPS19P39019 145 aaKnown RBP6.01□□□□□ -1.45
SUB1-204ENST00000504016 ABHD18Q0P651 414 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 NFYCQ13952 458 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 EIF4HQ15056 248 aaKnown RBP6.01□□□□□ -1.45
SUB1-204ENST00000504016 CRB2Q5IJ48 1285 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 USP30Q70CQ3 517 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 LARP4Q71RC2 724 aaKnown RBP eCLIP6.01□□□□□ -1.453e-12■□□□□ 9.8
SUB1-204ENST00000504016 C1orf210Q8IVY1 113 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 JMYQ8N9B5 988 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 CLUHP3Q96NS8 147 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 BTBD2Q9BX70 525 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 UCKL1Q9NWZ5 548 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 BTBD7Q9P203 1132 aa6.01□□□□□ -1.45
SUB1-204ENST00000504016 PLSCR1O15162 318 aa6□□□□□ -1.45
SUB1-204ENST00000504016 ZNF202O95125 648 aa6□□□□□ -1.45
SUB1-204ENST00000504016 RASGRP1O95267 797 aa6□□□□□ -1.45
SUB1-204ENST00000504016 ECE1P42892 770 aa6□□□□□ -1.45
SUB1-204ENST00000504016 MEOX1P50221 254 aa6□□□□□ -1.45
SUB1-204ENST00000504016 PTH1RQ03431 593 aa6□□□□□ -1.45
SUB1-204ENST00000504016 STILQ15468 1287 aa6□□□□□ -1.45
SUB1-204ENST00000504016 LSM12Q3MHD2 195 aaKnown RBP6□□□□□ -1.45
SUB1-204ENST00000504016 MAMDC4Q6UXC1 1216 aa6□□□□□ -1.45
SUB1-204ENST00000504016 FGD2Q7Z6J4 655 aa6□□□□□ -1.45
SUB1-204ENST00000504016 RTKN2Q8IZC4 609 aa6□□□□□ -1.45
SUB1-204ENST00000504016 SMURF1Q9HCE7 757 aa6□□□□□ -1.45
SUB1-204ENST00000504016 A0A0G2JNJ9 132 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 LACTBP83111 547 aaPredicted RBP5.99□□□□□ -1.45
SUB1-204ENST00000504016 DGCR2P98153 550 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 CD83Q01151 205 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 DUSP8Q13202 625 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 PCOLCEQ15113 449 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 LRSAM1Q6UWE0 723 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 BRAPQ7Z569 592 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 FILIP1Q7Z7B0 1213 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 CISD2Q8N5K1 135 aaKnown RBP5.99□□□□□ -1.45
SUB1-204ENST00000504016 PLEKHG4BQ96PX9 1271 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 AMNQ9BXJ7 453 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 NCOA5Q9HCD5 579 aaKnown RBP5.99□□□□□ -1.45
SUB1-204ENST00000504016 Q9UFV3 132 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 SFMBT1Q9UHJ3 866 aa5.99□□□□□ -1.45
SUB1-204ENST00000504016 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.98□□□□□ -1.45
SUB1-204ENST00000504016 SCDO00767 359 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 MPIG6BO95866 241 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 MMEP08473 750 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 HIBADHP31937 336 aaKnown RBP5.98□□□□□ -1.45
SUB1-204ENST00000504016 MSX2P35548 267 aaPredicted RBP5.98□□□□□ -1.45
SUB1-204ENST00000504016 MRE11P49959 708 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 FOXL1Q12952 345 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 MOGSQ13724 837 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 TKFCQ3LXA3 575 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 ZC3H12BQ5HYM0 836 aaKnown RBP5.98□□□□□ -1.45
SUB1-204ENST00000504016 TRIM68Q6AZZ1 485 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 IGFL4Q6B9Z1 124 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 NOP9Q86U38 636 aaKnown RBP5.98□□□□□ -1.45
SUB1-204ENST00000504016 ZNF808Q8N4W9 903 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms