RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 SREBF2Q12772 1141 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 CASP8Q14790 479 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 SARM1Q6SZW1 724 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 LRRC49Q8IUZ0 686 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TEKT4Q8WW24 435 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 GOLGA1Q92805 767 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ZNF274Q96GC6 653 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ZIC5Q96T25 663 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 PTPN18Q99952 460 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 ANO10Q9NW15 660 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
PDLIM5-207ENST00000503974 TMEM232C9JQI7 657 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 NPTXRO95502 500 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 SYF2O95926 243 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 BMP3P12645 472 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 ALDH3A1P30838 453 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 SLC1A4P43007 532 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 KIF23Q02241 960 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 ASPRV1Q53RT3 343 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 GPATCH4Q5T3I0 446 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 TRIM65Q6PJ69 517 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 BTNL9Q6UXG8 535 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 SPICE1Q8N0Z3 855 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 MAIP1Q8WWC4 291 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 NAT10Q9H0A0 1025 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 JADE2Q9NQC1 790 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 MAD2L2Q9UI95 211 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 MYPNQ86TC9 1320 aa10.5□□□□□ -0.73
PDLIM5-207ENST00000503974 CFAP69A5D8W1 941 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 TMEM247A6NEH6 219 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 BTBD19C9JJ37 291 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 IGF2BP3O00425 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 ZBTB43O43298 467 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 NDUFB5O43674 189 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 PDIA3P30101 505 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 PPP2R5BQ15173 497 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 FAM83BQ5T0W9 1011 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 TMCO4Q5TGY1 634 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 GADL1Q6ZQY3 521 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 CATSPERGQ6ZRH7 1159 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 PPP2R3CQ969Q6 453 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 DHTKD1Q96HY7 919 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 MYL10Q9BUA6 226 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 VIPAS39Q9H9C1 493 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 FAM217BQ9NTX9 383 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 GOLGA8BA8MQT2 603 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 AOC2O75106 756 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 CCDC166P0CW27 439 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 PPP2R3AQ06190 1150 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 TYRO3Q06418 890 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 PPFIA1Q13136 1202 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 LBX2Q6XYB7 198 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 MICU3Q86XE3 530 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 ZNF570Q96NI8 536 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 NUP88Q99567 741 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 ACTR5Q9H9F9 607 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 METTL14Q9HCE5 456 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 ABCB6Q9NP58 842 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 GGA2Q9UJY4 613 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 C2CD2Q9Y426 696 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
PDLIM5-207ENST00000503974 GRIN2DO15399 1336 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ADGRA2Q96PE1 1338 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 TRIM64CA6NLI5 447 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 FANCGO15287 622 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 PFKFB2O60825 505 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 TMCC1O94876 653 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 PDGFRBP09619 1106 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 MSL3P1P0C860 447 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 KIF5BP33176 963 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 CCT8P50990 548 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 BPIFB4P59827 614 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ARPC4P59998 168 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 DMPKQ09013 629 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 MYO1EQ12965 1108 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 MAP7D1Q3KQU3 841 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 CRELD2Q6UXH1 353 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 FAM160B2Q86V87 743 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 DNAJC5GQ8N7S2 189 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms