RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 FSTL1Q12841 308 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 ADAM9Q13443 819 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 CCDC40Q4G0X9 1142 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 ATP6V0A1Q93050 837 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 CCDC43Q96MW1 224 aaKnown RBP24.27■■□□□ 1.48
PTPN13-205ENST00000502971 KIAA1217Q5T5P2 1943 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 SOWAHBA6NEL2 793 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 USP27XA6NNY8 438 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 MAPTP10636 758 aaKnown RBP24.27■■□□□ 1.48
PTPN13-205ENST00000502971 MAPK7Q13164 816 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 ZNF720Q7Z2F6 126 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 FAM178BQ8IXR5 827 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 FIZ1Q96SL8 496 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 MPHOSPH6Q99547 160 aaKnown RBP24.27■■□□□ 1.48
PTPN13-205ENST00000502971 POLD4Q9HCU8 107 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 SLC45A1Q9Y2W3 748 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 ZBTB48P10074 688 aaPredicted RBP24.26■■□□□ 1.47
PTPN13-205ENST00000502971 SYCP1Q15431 976 aa24.26■■□□□ 1.47
PTPN13-205ENST00000502971 ODR4Q5SWX8 454 aa24.26■■□□□ 1.47
PTPN13-205ENST00000502971 MROH8Q9H579 483 aa24.26■■□□□ 1.47
PTPN13-205ENST00000502971 TRMT1Q9NXH9 659 aaKnown RBP24.26■■□□□ 1.47
PTPN13-205ENST00000502971 CAPN11Q9UMQ6 739 aa24.26■■□□□ 1.47
PTPN13-205ENST00000502971 CETPP11597 493 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 NR2F2P24468 414 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 RPL13P26373 211 aaKnown RBP24.25■■□□□ 1.47
PTPN13-205ENST00000502971 NMT1P30419 496 aaKnown RBP24.25■■□□□ 1.47
PTPN13-205ENST00000502971 HUNKP57058 714 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 NFIL3Q16649 462 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 Q3C1V9 767 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 FIGNQ5HY92 759 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 OTUD6AQ7L8S5 288 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 DAW1Q8N136 415 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 SHCBP1Q8NEM2 672 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 BCAS3Q9H6U6 928 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 ABHD10Q9NUJ1 306 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 LARSQ9P2J5 1176 aaKnown RBP24.25■■□□□ 1.47
PTPN13-205ENST00000502971 GABBR1Q9UBS5 961 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 PCDHB13Q9Y5F0 798 aa24.25■■□□□ 1.47
PTPN13-205ENST00000502971 ZSCAN12O43309 604 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 GTF2A2P52657 109 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 MIS18BP1Q6P0N0 1132 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 SAPCD2Q86UD0 394 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 C16orf45Q96MC5 204 aaPredicted RBP24.24■■□□□ 1.47
PTPN13-205ENST00000502971 NKRFO15226 690 aaKnown RBP eCLIP24.24■■□□□ 1.47
PTPN13-205ENST00000502971 KRT9P35527 623 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 ACTR2P61160 394 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 ALCAMQ13740 583 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 KCTD2Q14681 263 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 PTPN14Q15678 1187 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 XKR9Q5GH70 373 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 ABHD15Q6UXT9 468 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 NYAP1Q6ZVC0 841 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 PPP1R13BQ96KQ4 1090 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 MMP19Q99542 508 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 FAM184BQ9ULE4 1060 aa24.24■■□□□ 1.47
PTPN13-205ENST00000502971 LUC7L2Q9Y383 392 aaKnown RBP24.24■■□□□ 1.47
PTPN13-205ENST00000502971 TTC26A0AVF1 554 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 KIF2AO00139 706 aaPredicted RBP24.23■■□□□ 1.47
PTPN13-205ENST00000502971 BACH1O14867 736 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 TNNT1P13805 278 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 ERVK-9P63128 1117 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 ERVK-24P63145 666 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 FRMD5Q7Z6J6 570 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 TMTC1Q8IUR5 882 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 TRIM59Q8IWR1 403 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 DRC1Q96MC2 740 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 PCMTD1Q96MG8 357 aaPredicted RBP24.23■■□□□ 1.47
PTPN13-205ENST00000502971 STRA6Q9BX79 667 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 TTYH3Q9C0H2 523 aa24.23■■□□□ 1.47
PTPN13-205ENST00000502971 R3HCC1Q9Y3T6 440 aaKnown RBP24.23■■□□□ 1.47
PTPN13-205ENST00000502971 A0A1W2PQJ5 194 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 RNF225M0QZC1 329 aaPredicted RBP24.22■■□□□ 1.47
PTPN13-205ENST00000502971 USO1O60763 962 aaKnown RBP24.22■■□□□ 1.47
PTPN13-205ENST00000502971 NR3C1P04150 777 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 TGFB3P10600 412 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 PLS3P13797 630 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 TRIM21P19474 475 aaKnown RBP24.22■■□□□ 1.47
PTPN13-205ENST00000502971 TERF1P54274 439 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 SP2Q02086 613 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 SWSAP1Q6NVH7 229 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 SEPT14Q6ZU15 432 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 OR8K1Q8NGG5 319 aa24.22■■□□□ 1.47
PTPN13-205ENST00000502971 DNAJC25-GNG10A0A024R161 153 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 SLC16A3O15427 465 aaKnown RBP24.21■■□□□ 1.47
PTPN13-205ENST00000502971 ATG7O95352 703 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 TUBB4AP04350 444 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 SUPT20HL2P0C7V6 817 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 UTP14CQ5TAP6 766 aaKnown RBP24.21■■□□□ 1.47
PTPN13-205ENST00000502971 ANO5Q75V66 913 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 SLC17A8Q8NDX2 589 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 MS4A4AQ96JQ5 239 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 SIK3Q9Y2K2 1263 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 ZMYM2Q9UBW7 1377 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 LOC102724159A0A0B4J2E5 919 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 RASSF10A6NK89 507 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 TGFB1I1O43294 461 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 PPP1R37O75864 691 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 STBD1O95210 358 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 PPP2R3AQ06190 1150 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 KCNA1Q09470 495 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms