RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 KHSRPQ92945 711 aaKnown RBP eCLIP25.59■■□□□ 1.69
CDKN2A-208ENST00000498124 FTHL17Q9BXU8 183 aa25.59■■□□□ 1.69
CDKN2A-208ENST00000498124 CD320Q9NPF0 282 aa25.59■■□□□ 1.69
CDKN2A-208ENST00000498124 GRM6O15303 877 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 RB1P06400 928 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 GNA11P29992 359 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 TOB2Q14106 344 aaPredicted RBP25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 BTG3Q14201 252 aaPredicted RBP25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 TMEM266Q2M3C6 531 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 ZNF746Q6NUN9 644 aaPredicted RBP25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 MIS18BP1Q6P0N0 1132 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 TMEM40Q8WWA1 233 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 SLC26A6Q9BXS9 759 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 NSUN3Q9H649 340 aaKnown RBP25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 CDHR5Q9HBB8 845 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 TBC1D22BQ9NU19 505 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 VPS54Q9P1Q0 977 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 RAPGEFL1Q9UHV5 662 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 MAFBQ9Y5Q3 323 aaPredicted RBP25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 MRPL42Q9Y6G3 142 aaKnown RBP25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 WDR81Q562E7 1941 aa25.58■■□□□ 1.69
CDKN2A-208ENST00000498124 C22orf31O95567 290 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 ANKRD1Q15327 319 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 PRR16Q569H4 304 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 ZNF484Q5JVG2 852 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 NPAS4Q8IUM7 802 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 C11orf84Q9BUA3 381 aaPredicted RBP25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 ERVK-5Q9HDB9 667 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 RWDD3Q9Y3V2 267 aa25.57■■□□□ 1.68
CDKN2A-208ENST00000498124 EVPLQ92817 2033 aa25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 MGEA5O60502 916 aa25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 IL9P15248 144 aa25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 CCT2P78371 535 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 CMTR2Q8IYT2 770 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 PABPC5Q96DU9 382 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 EPHX3Q9H6B9 360 aa25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 NOC2LQ9Y3T9 749 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 MYH9P35579 1960 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 C5orf42Q9H799 3197 aa25.56■■□□□ 1.68
CDKN2A-208ENST00000498124 H3BQ06 376 aaPredicted RBP25.55■■□□□ 1.68
CDKN2A-208ENST00000498124 NEK4P51957 841 aa25.55■■□□□ 1.68
CDKN2A-208ENST00000498124 SMAP1Q8IYB5 467 aaPredicted RBP25.55■■□□□ 1.68
CDKN2A-208ENST00000498124 CCDC148Q8NFR7 591 aa25.55■■□□□ 1.68
CDKN2A-208ENST00000498124 TBC1D32Q96NH3 1257 aa25.55■■□□□ 1.68
CDKN2A-208ENST00000498124 LMAN2LQ9H0V9 348 aa25.55■■□□□ 1.68
CDKN2A-208ENST00000498124 GATMP50440 423 aa25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 AKAP17AQ02040 695 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 CAMK1Q14012 370 aa25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 PTCRAQ6ISU1 281 aaPredicted RBP25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 BICD2Q8TD16 824 aa25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 BBXQ8WY36 941 aaPredicted RBP25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 KIF2CQ99661 725 aa25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 GINS2Q9Y248 185 aa25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 PCDHA10Q9Y5I2 948 aa25.54■■□□□ 1.68
CDKN2A-208ENST00000498124 GRXCR2A6NFK2 248 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 MSH4O15457 936 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 MMP1P03956 469 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 LTBRP36941 435 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 FAM178BQ8IXR5 827 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 PLVAPQ9BX97 442 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 GABBR1Q9UBS5 961 aa25.53■■□□□ 1.68
CDKN2A-208ENST00000498124 PSAPP07602 524 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 AK2P54819 239 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 HYAL1Q12794 435 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 RABEP1Q15276 862 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 CTC1Q2NKJ3 1217 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 PAN2Q504Q3 1202 aaKnown RBP25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 LINC01465Q8N7H1 131 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 ZNF274Q96GC6 653 aaPredicted RBP25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 PPP1R16BQ96T49 567 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 C1QTNF1Q9BXJ1 281 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 SH3GLB2Q9NR46 395 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 PLAGL2Q9UPG8 496 aa25.52■■□□□ 1.68
CDKN2A-208ENST00000498124 FNDC1Q4ZHG4 1894 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 ZNF862O60290 1169 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 GPR32O75388 356 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 RPS6KA5O75582 802 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 STAG3L1P0CL83 205 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 DNAJB1P25685 340 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 SARSP49591 514 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 NFX1Q12986 1120 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 KIZQ2M2Z5 673 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 FAM228AQ86W67 206 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 CKAP2LQ8IYA6 745 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 P2RX5Q93086 422 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 OSMRQ99650 979 aa25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 ALG13Q9NP73 1137 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-208ENST00000498124 WDR64B1ANS9 1081 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 VTNP04004 478 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 ITGB1P05556 798 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 NPY5RQ15761 445 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 UGCGQ16739 394 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 TRMT1LQ7Z2T5 733 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 SLC5A5Q92911 643 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 LARP6Q9BRS8 491 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 C11orf16Q9NQ32 467 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 RGS18Q9NS28 235 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 CLDND1Q9NY35 253 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 ST3GAL5Q9UNP4 418 aa25.5■■□□□ 1.67
CDKN2A-208ENST00000498124 M0R2N6 131 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms