RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 FNDC1Q4ZHG4 1894 aaPredicted RBP24.81■■□□□ 1.56
CLIC4-204ENST00000497755 PER2O15055 1255 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 HBP1O60381 514 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 NAPAP54920 295 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 FUT2Q10981 343 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 FAM102BQ5T8I3 360 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 FAM43BQ6ZT52 329 aaPredicted RBP24.8■■□□□ 1.56
CLIC4-204ENST00000497755 TEX2Q8IWB9 1127 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 MICAL1Q8TDZ2 1067 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 ADAM2Q99965 735 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 ANO3Q9BYT9 981 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 RGS18Q9NS28 235 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 USP15Q9Y4E8 981 aaPredicted RBP24.8■■□□□ 1.56
CLIC4-204ENST00000497755 PCDHB12Q9Y5F1 795 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 CNTNAP5Q8WYK1 1306 aa24.8■■□□□ 1.56
CLIC4-204ENST00000497755 TMEM221A6NGB7 291 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 M0R296 226 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 RPS6KA5O75582 802 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 ERVFC1P60507 584 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 RBM10P98175 930 aaKnown RBP24.79■■□□□ 1.56
CLIC4-204ENST00000497755 UBE3AQ05086 875 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 ATP8B4Q8TF62 1192 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 ESYT1Q9BSJ8 1104 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 TMEM260Q9NX78 707 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 ST3GAL5Q9UNP4 418 aa24.79■■□□□ 1.56
CLIC4-204ENST00000497755 V9GY48 417 aaPredicted RBP24.79■■□□□ 1.56
CLIC4-204ENST00000497755 TBKBP1A7MCY6 615 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 ZBTB42B2RXF5 422 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 C9IYK1 514 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 SREBF1P36956 1147 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 ADCY7P51828 1080 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 ZXDAP98168 799 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 SPOUT1Q5T280 376 aaKnown RBP24.78■■□□□ 1.56
CLIC4-204ENST00000497755 IER5LQ5T953 404 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 PPP1R18Q6NYC8 613 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 SYNE3Q6ZMZ3 975 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 SLC24A5Q71RS6 500 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 VN1R2Q8NFZ6 395 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 PBXIP1Q96AQ6 731 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 PHF7Q9BWX1 381 aaPredicted RBP24.78■■□□□ 1.56
CLIC4-204ENST00000497755 C1orf112Q9NSG2 853 aa24.78■■□□□ 1.56
CLIC4-204ENST00000497755 TYW1Q9NV66 732 aaKnown RBP24.78■■□□□ 1.56
CLIC4-204ENST00000497755 SMCO2A6NFE2 343 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 DDX39AO00148 427 aaKnown RBP24.77■■□□□ 1.56
CLIC4-204ENST00000497755 BACH1O14867 736 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 DHX15O43143 795 aaKnown RBP24.77■■□□□ 1.56
CLIC4-204ENST00000497755 FGF18O76093 207 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 ATP4AP20648 1035 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 CLK2P49760 499 aaKnown RBP24.77■■□□□ 1.56
CLIC4-204ENST00000497755 ZNF484Q5JVG2 852 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 APOA5Q6Q788 366 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 NIPA1Q7RTP0 329 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 CCDC60Q8IWA6 550 aaPredicted RBP24.77■■□□□ 1.56
CLIC4-204ENST00000497755 TLR9Q9NR96 1032 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 AAASQ9NRG9 546 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 RBM28Q9NW13 759 aaKnown RBP24.77■■□□□ 1.56
CLIC4-204ENST00000497755 HCSTQ9UBK5 93 aa24.77■■□□□ 1.56
CLIC4-204ENST00000497755 DENND3A2RUS2 1198 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 GPR182O15218 404 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 FAM189BP81408 668 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 DUSP6Q16828 381 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 FAM160B1Q5W0V3 765 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 SWSAP1Q6NVH7 229 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 PRSS33Q8NF86 280 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 SUSD6Q92537 303 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 ZNF302Q9NR11 478 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 RNF216Q9NWF9 866 aaPredicted RBP24.76■■□□□ 1.55
CLIC4-204ENST00000497755 BRPF3Q9ULD4 1205 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 COL1A2P08123 1366 aa24.76■■□□□ 1.55
CLIC4-204ENST00000497755 FAM86B1E9PN63 330 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 FAM86B2P0C5J1 330 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 ZNF76P36508 570 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 EXOSC10Q01780 885 aaKnown RBP24.75■■□□□ 1.55
CLIC4-204ENST00000497755 AP3B2Q13367 1082 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 ODR4Q5SWX8 454 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 PDXDC2PQ6P474 469 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 COLGALT1Q8NBJ5 622 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 RPGRIP1Q96KN7 1286 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 PHOX2BQ99453 314 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 CWH43Q9H720 699 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 BARHL2Q9NY43 387 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 USP34Q70CQ2 3546 aa24.75■■□□□ 1.55
CLIC4-204ENST00000497755 FSCN2O14926 492 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 FGFR1P11362 822 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 CRYBB1P53674 252 aaPredicted RBP24.74■■□□□ 1.55
CLIC4-204ENST00000497755 RTN1Q16799 776 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 KIZQ2M2Z5 673 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 MIS18BP1Q6P0N0 1132 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 FAM228AQ86W67 206 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 PLA2G4DQ86XP0 818 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 PPP1R16BQ96T49 567 aa24.74■■□□□ 1.55
CLIC4-204ENST00000497755 CDCA3Q99618 268 aaPredicted RBP24.74■■□□□ 1.55
CLIC4-204ENST00000497755 CACNA1HO95180 2353 aa24.73■■□□□ 1.55
CLIC4-204ENST00000497755 MYH9P35579 1960 aaKnown RBP24.73■■□□□ 1.55
CLIC4-204ENST00000497755 IGLV3-22A0A075B6J6 115 aa24.73■■□□□ 1.55
CLIC4-204ENST00000497755 GPR32O75388 356 aa24.73■■□□□ 1.55
CLIC4-204ENST00000497755 ATF7P17544 494 aaPredicted RBP24.73■■□□□ 1.55
CLIC4-204ENST00000497755 KCNC3Q14003 757 aa24.73■■□□□ 1.55
CLIC4-204ENST00000497755 PKN1Q16512 942 aa24.73■■□□□ 1.55
CLIC4-204ENST00000497755 PDE12Q6L8Q7 609 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms