RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 HAS1Q92839 578 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 SCLYQ96I15 445 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.34
HLA-B-254ENST00000497377 NRBP2Q9NSY0 501 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 PCDHA12Q9UN75 941 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 ACTN1P12814 892 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 THPOP40225 353 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 MARCH8Q5T0T0 291 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 ZNF618Q5T7W0 954 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
HLA-B-254ENST00000497377 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 C16orf59Q7L2K0 433 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 WNT8BQ93098 351 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 GJA10Q969M2 543 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
HLA-B-254ENST00000497377 PCDHA2Q9Y5H9 948 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
HLA-B-254ENST00000497377 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 RSPH10B2B2RC85 870 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 MAGEB2O15479 319 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 CXCL10P02778 98 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 OATP04181 439 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 RSPH10BP0C881 870 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 ACRP10323 421 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 ATP4AP20648 1035 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 MCM7P33993 719 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 PSMC5P62195 406 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 IGBP1P78318 339 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 PRKCEQ02156 737 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 EPHA7Q15375 998 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 XKR3Q5GH77 459 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 MCTP1Q6DN14 999 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 TRAF7Q6Q0C0 670 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 HSCBQ8IWL3 235 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 NME8Q8N427 588 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 MTMR9Q96QG7 549 aa12.88□□□□□ -0.35
HLA-B-254ENST00000497377 LAMA2P24043 3122 aaKnown RBP12.88□□□□□ -0.35
HLA-B-254ENST00000497377 KIF28PB7ZC32 967 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 WNT7AO00755 349 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 ZNF862O60290 1169 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 EFCAB14O75071 495 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 BAIAP3O94812 1187 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
HLA-B-254ENST00000497377 OR52Z1P0C646 297 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 KLRC1P26715 233 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
HLA-B-254ENST00000497377 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
HLA-B-254ENST00000497377 SPIRE1Q08AE8 756 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 UGCGQ16739 394 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 IER5Q5VY09 327 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 RUFY4Q6ZNE9 571 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
HLA-B-254ENST00000497377 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
HLA-B-254ENST00000497377 RYDENQ9NUL5 291 aaKnown RBP12.87□□□□□ -0.35
HLA-B-254ENST00000497377 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
HLA-B-254ENST00000497377 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.86□□□□□ -0.35
HLA-B-254ENST00000497377 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.86□□□□□ -0.35
HLA-B-254ENST00000497377 ZBTB42B2RXF5 422 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 M0QZ92 97 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 EML1O00423 815 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 LAD1O00515 517 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 TXKP42681 527 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 SMAD3P84022 425 aaKnown RBP12.86□□□□□ -0.35
HLA-B-254ENST00000497377 ZNF174Q15697 407 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 CNKSR3Q6P9H4 555 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
HLA-B-254ENST00000497377 TRAPPC12Q8WVT3 735 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 DNAJB3Q8WWF6 145 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 VWCEQ96DN2 955 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 NIFKQ9BYG3 293 aaKnown RBP12.86□□□□□ -0.35
HLA-B-254ENST00000497377 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 SQORQ9Y6N5 450 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 LAMA3Q16787 3333 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 EVPLQ92817 2033 aa12.86□□□□□ -0.35
HLA-B-254ENST00000497377 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 NBNO60934 754 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 C22orf31O95567 290 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
HLA-B-254ENST00000497377 TMOD1P28289 359 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 TOB1P50616 345 aaPredicted RBP12.85□□□□□ -0.35
HLA-B-254ENST00000497377 MRPS6P82932 125 aaKnown RBP12.85□□□□□ -0.35
HLA-B-254ENST00000497377 MBTPS1Q14703 1052 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 GPNMBQ14956 572 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 TARBP2Q15633 366 aaKnown RBP12.85□□□□□ -0.35
HLA-B-254ENST00000497377 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 OTOP2Q7RTS6 562 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms