RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ZSCAN18Q8TBC5 510 aaPredicted RBP6.07□□□□□ -1.44
CSMD3-208ENST00000497026 GREM2Q9H772 168 aa6.07□□□□□ -1.44
CSMD3-208ENST00000497026 PTPRCP08575 1304 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 ZBED9Q6R2W3 1325 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 FADS2P1A8MWK0 482 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 H0Y8X5 98 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 TOMM70O94826 608 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 ZNF205O95201 554 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 CSF1RP07333 972 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 HSP90AA1P07900 732 aaKnown RBP6.06□□□□□ -1.44
CSMD3-208ENST00000497026 GSTM1P09488 218 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 MED14OSP0DP75 135 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 GUCY2CP25092 1073 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 LINC00310P59036 64 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 RPS8P62241 208 aaKnown RBP6.06□□□□□ -1.44
CSMD3-208ENST00000497026 GPSM2P81274 684 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 FOXO4P98177 505 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 KIAA2012Q0VF49 1180 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 ALDH1L2Q3SY69 923 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 CCDC152Q4G0S7 254 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 HSF5Q4G112 596 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-208ENST00000497026 DPP8Q6V1X1 898 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-208ENST00000497026 KAZALD1Q96I82 304 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 FCRL2Q96LA5 508 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-208ENST00000497026 TM9SF2Q99805 663 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 IRF2BPLQ9H1B7 796 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 SMC4Q9NTJ3 1288 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 ERVK13-1Q9NX77 482 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 POLLQ9UGP5 575 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 ZNF451Q9Y4E5 1061 aa6.06□□□□□ -1.44
CSMD3-208ENST00000497026 UTYO14607 1347 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 YDJCA8MPS7 323 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 GRM8O00222 908 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 NUAK1O60285 661 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 ALDH1L1O75891 902 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 NBPF7P0C2Y1 421 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 HSP90B1P14625 803 aaKnown RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 BMP8BP34820 402 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 RARSP54136 660 aaKnown RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 ZNF445P59923 1031 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 HDLBPQ00341 1268 aaKnown RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 HSP90AA2PQ14568 343 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 EPHA10Q5JZY3 1008 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 RTP2Q5QGT7 225 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 SLC4A10Q6U841 1118 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 TMEM52Q8NDY8 209 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 MRRFQ96E11 262 aaKnown RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 GPR101Q96P66 508 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-208ENST00000497026 GP6Q9HCN6 339 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 TNFRSF10DQ9UBN6 386 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 RAPGEFL1Q9UHV5 662 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
CSMD3-208ENST00000497026 WTIPA6NIX2 430 aaPredicted RBP6.04□□□□□ -1.44
CSMD3-208ENST00000497026 VEGFAP15692 232 aaPredicted RBP6.04□□□□□ -1.44
CSMD3-208ENST00000497026 PRKCAP17252 672 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
CSMD3-208ENST00000497026 L1TD1Q5T7N2 865 aaKnown RBP6.04□□□□□ -1.44
CSMD3-208ENST00000497026 CIAPIN1Q6FI81 312 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 NT5DC4Q86YG4 428 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 ANKRD18AQ8IVF6 992 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 SUPT20HQ8NEM7 779 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 TBC1D16Q8TBP0 767 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 JDP2Q8WYK2 163 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 SUCLG2Q96I99 432 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 JMJD8Q96S16 334 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 CRBNQ96SW2 442 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 SLC12A9Q9BXP2 914 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 VPS33BQ9H267 617 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 GCM1Q9NP62 436 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 TNNQ9UQP3 1299 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.04□□□□□ -1.44
CSMD3-208ENST00000497026 TAF6LQ9Y6J9 622 aa6.04□□□□□ -1.44
CSMD3-208ENST00000497026 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 UNCXA6NJT0 531 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 PEX10O60683 326 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 BCAR3O75815 825 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 GSNP06396 782 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 PNLIPP16233 465 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 CXCL9Q07325 125 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 PPP2R5DQ14738 602 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 RABL6Q3YEC7 729 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 CWF19L1Q69YN2 538 aaKnown RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 GALNT18Q6P9A2 607 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 LMBR1LQ6UX01 489 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 SIAH1Q8IUQ4 282 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 NIM1KQ8IY84 436 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 GPC2Q8N158 579 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 FIBCD1Q8N539 461 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 TAB3Q8N5C8 712 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 NAT16Q8N8M0 369 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 RBBP8NLQ8NC74 664 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 NUP43Q8NFH3 380 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 ADCY4Q8NFM4 1077 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 ZDHHC15Q96MV8 337 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 CDC5LQ99459 802 aaKnown RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 USP44Q9H0E7 712 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms